| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_3019 |
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| Symbol | |
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| ID | 5346821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cytotoxicus NVH 391-98 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009674 |
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| Strand | - |
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| Start bp | 3067170 |
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| End bp | 3068291 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640840516 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001376241 |
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| Protein GI | 152976724 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000207905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA AACCAGCTCG TTCTAAACAA ATTGAAACTG AAATGACCCT TGAGCAAGTG
AAAGAACAAC TCACTGAGCT CGGAAAAAAA CGTGGCGTTC TTACATACGA AGAGATTGCA
GAACGCATGA ACGGATTTGA AATTGAATCC GAACAAATGG ATGAATATTA TGAATATTTA
GGTGAACAAG GGATTGATTT AGTTGGTGAT AATGATGAAG GCCCAAATAA TCATCAAATC
ACAAAAACGG AAGAAGAATT CGATCTAAAC GATTTAAGTG TACCACCAGG TGTGAAAATC
AATGACCCTG TTCGCATGTA TTTAAAAGAA ATTGGTCGTG TTGATTTATT ATCTGCTGAA
GAAGAAATTC AATTGGCGAC TCGTATTGAA GAAGGCGATG AAGAAGCAAA ACGCCGTCTT
GCAGAAGCAA ACTTACGTCT TGTTGTAAGT ATTGCAAAAA GATACGTTGG CCGCGGTATG
CTTTTCTTAG ACCTTATTCA AGAAGGGAAT ATGGGTCTAA TTAAAGCGGT TGAAAAGTTC
GACTACCGCA AAGGATTTAA ATTTAGTACG TATGCAACAT GGTGGATTCG TCAAGCGATT
ACACGTGCGA TTGCAGACCA AGCAAGAACC ATTCGTATTC CGGTTCATAT GGTTGAAACA
ATCAATAAAT TAATTCGTGT ACAACGTCAA TTATTACAAG ATTTAGGTCG TGAACCAACT
CCGGAAGAGA TTGGTGAAGA AATGGATCTT GCTCCAGAAA AAGTACGCGA AATCTTAAAG
ATTGCTCAGG AGCCAGTTTC TCTTGAAACA CCGATTGGTG AAGAGGATGA CTCACACTTA
GGCGATTTTA TCGAAGACCA AGAAGCAACA TCACCTGCGG ATCATGCAGC ATATGAATTG
CTGAAAGAAC AATTAGAAGA TGTGTTAGAT ACGCTAACAG ATCGTGAAGA AAATGTTCTT
CGTCTTCGTT TTGGTTTGGA TGATGGACGA ACTCGTACGC TTGAAGAAGT CGGAAAAGTA
TTCGGCGTAA CAAGAGAGCG TATTCGTCAA ATTGAAGCAA AAGCACTTCG TAAATTAAGA
CATCCAAGCC GTAGCAAACG GTTAAAAGAT TTCTTAGAGT AG
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| Protein sequence | MADKPARSKQ IETEMTLEQV KEQLTELGKK RGVLTYEEIA ERMNGFEIES EQMDEYYEYL
GEQGIDLVGD NDEGPNNHQI TKTEEEFDLN DLSVPPGVKI NDPVRMYLKE IGRVDLLSAE
EEIQLATRIE EGDEEAKRRL AEANLRLVVS IAKRYVGRGM LFLDLIQEGN MGLIKAVEKF
DYRKGFKFST YATWWIRQAI TRAIADQART IRIPVHMVET INKLIRVQRQ LLQDLGREPT
PEEIGEEMDL APEKVREILK IAQEPVSLET PIGEEDDSHL GDFIEDQEAT SPADHAAYEL
LKEQLEDVLD TLTDREENVL RLRFGLDDGR TRTLEEVGKV FGVTRERIRQ IEAKALRKLR
HPSRSKRLKD FLE
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