Gene Bcer98_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3006 
SymbolispG 
ID5343826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand+ 
Start bp3055352 
End bp3056458 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content40% 
IMG OID640840503 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_001376228 
Protein GI152976711 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGAAA TAACTCATCG TACAAAAACA CGTCCGGTTA AAGTCGGTAA TTTAACAATT 
GGTGGTAATA ATGAATTAAT TATACAAAGT ATGACTACAA CAAAAACGCA TGATGTAGAA 
GCAACTGTTG CTGAAATTAA GCGTTTAGAA GAAGCAGGCT GTCAAATTGT CCGCGTAGCT 
GTTCCAGACG AACGAGCTGC AAATGCCATT GCTGATATTA AAAAGCAAAT TAATATTCCG 
CTTGTTGCTG ATATTCATTT TGACTATCGT CTTGCTTTAA AGGCAATCGA AGGTGGCATT 
GATAAAGTGC GTATTAACCC GGGTAATATC GGGCGCCGCC ACAAAGTAGA AGCTGTTGTA 
AATGCTGCCA AAGAGCGCGG TATTCCAATT CGAATTGGTG TAAATGCCGG TTCATTAGAG 
CGTCATATTC TAGAAAAGTA TGGCTACCCT ACTGCTGATG GTATGGTCGA GAGCGCATTG 
CATCATATTA AAATTTTAGA GGACTTAGAC TTTCATGATA TTATCGTATC GATGAAAGCA 
TCCGATGTAA ATTTAGCTAT TGAAGCTTAT GAGAAAGCAG CTCGTGCTTT CGATTATCCA 
TTGCATTTAG GCATTACAGA GTCCGGTACT CTATTTGCCG GAACAGTTAA AAGTGCCGCT 
GGTCTTGGAG CTATTTTAAG CAAAGGTATC GGAAATACAC TTCGCATCTC GCTAAGTGCT 
GATCCAGTTG AAGAAGTAAA AGTGGCTCGT GAATTGTTAA AGTCATTTGG TCTTGCTTCA 
AATGCCGCAA CACTTATTTC TTGTCCAACT TGCGGACGTA TTGAAATCGA CCTAATCAGT 
ATTGCAAATG AAGTGGAAGA GTATATCTCT ACATTAAAAG TACCGATTAA AGTAGCTGTG 
CTTGGCTGTG CAGTAAATGG CCCAGGCGAA GCTCGTGAAG CTGATATCGG GATTGCTGGA 
GCACGTGGTG AAGGCTTATT ATTCCGCAAA GGAAAAGTTG TTCGAAAAGT TCCAGAAGAA 
ACAATGGTAG AAGAACTCAA AAAAGAAATT GATGTCATCG CTGCTGAAAT GGCTGAAAAC 
CAAGAAAAAG AAAAACAAGA ACAATAA
 
Protein sequence
MNEITHRTKT RPVKVGNLTI GGNNELIIQS MTTTKTHDVE ATVAEIKRLE EAGCQIVRVA 
VPDERAANAI ADIKKQINIP LVADIHFDYR LALKAIEGGI DKVRINPGNI GRRHKVEAVV 
NAAKERGIPI RIGVNAGSLE RHILEKYGYP TADGMVESAL HHIKILEDLD FHDIIVSMKA 
SDVNLAIEAY EKAARAFDYP LHLGITESGT LFAGTVKSAA GLGAILSKGI GNTLRISLSA 
DPVEEVKVAR ELLKSFGLAS NAATLISCPT CGRIEIDLIS IANEVEEYIS TLKVPIKVAV 
LGCAVNGPGE AREADIGIAG ARGEGLLFRK GKVVRKVPEE TMVEELKKEI DVIAAEMAEN 
QEKEKQEQ