| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_2788 |
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| Symbol | xerD |
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| ID | 5345357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cytotoxicus NVH 391-98 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009674 |
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| Strand | - |
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| Start bp | 2868906 |
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| End bp | 2869796 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640840290 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001376016 |
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| Protein GI | 152976499 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC
[TIGR02225] tyrosine recombinase XerD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000777667 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAGATC AATTAAAAGA TTTTATTCAT TATATGGTTG TGGAAAAAGG ATTGGCCAAA
AATACGGTTG TATCTTATGA AAGAGATTTA AAAAGTTATG TAAAGTATTT GCAAAAGGTG
GAACAAATGA AAACTTTTCA TGAAGTGACT CGTATGCAAA TCGTTAACTT TTTGCAGCAT
TTAAGAGAGA ATGGAAAATC TTCAAAAACA TTAGCGCGTC ATATTGCATC GATTCGTTCA
TTTCATCAAT TTTTACTTCG TGAACGAGCT GTAGAACATG ATCCGTCAGT ACATATTGAA
ACACCACAAG GGGAGCGAAA ACTGCCGAAA GTTTTATCGG TAAGTGAGGT TGAAGCATTA
TTACAAACAC CAAAGACGAC GAGTGCTTAC GGTATTCGAG ATAAAGCAAT GTTGGAGTTA
TTGTATGCAA CAGGACTGCG TGTTTCGGAA TTAATTGCAC TCAACTTAGA GGATGTTCAT
TTAACAATGG GCTTTGTTCG CTGCGTCGGA AAAGGAAATA AGGAAAGAAT TATTCCACTT
GGAAGTTTAG CTACAGAAGC AATTCAGCGT TATATTGAAA AAGGAAGAAA AGAATTGATG
GGAAAAAAGG CAGTGGATGC ATTATTTTTA AATCACCACG GTAATCGATT ATCTCGTCAA
GGCTTTTGGA AGATTTTAAA ACGTTTAGCA AAAGAAGCAA ATATTGAGAA AGAGCTTACA
CCACATACAT TGCGCCATTC TTTTGCTACA CACCTGTTAG AAAATGGAGC AGACTTACGT
GCTGTACAGG AAATGTTAGG ACATGCAGAT ATTTCTACAA CACAAATTTA TACACATGTT
TCAAAAACGA GATTAAAAGA CGTATATAAG CAGTTTCACC CAAGAGCATA A
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| Protein sequence | MEDQLKDFIH YMVVEKGLAK NTVVSYERDL KSYVKYLQKV EQMKTFHEVT RMQIVNFLQH
LRENGKSSKT LARHIASIRS FHQFLLRERA VEHDPSVHIE TPQGERKLPK VLSVSEVEAL
LQTPKTTSAY GIRDKAMLEL LYATGLRVSE LIALNLEDVH LTMGFVRCVG KGNKERIIPL
GSLATEAIQR YIEKGRKELM GKKAVDALFL NHHGNRLSRQ GFWKILKRLA KEANIEKELT
PHTLRHSFAT HLLENGADLR AVQEMLGHAD ISTTQIYTHV SKTRLKDVYK QFHPRA
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