| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_2308 |
|---|
| Symbol | |
|---|
| ID | 5346597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | - |
|---|
| Start bp | 2400961 |
|---|
| End bp | 2402439 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640839823 |
|---|
| Product | sodium/proline symporter |
|---|
| Protein accession | YP_001375549 |
|---|
| Protein GI | 152976032 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.591948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGTTG AAATTATAAT TTCGCTTGCT ATTTATATGG CAGGTATGTT GTATATCGGA
TATTGGTCTT ATAAAAAGAC GTCCGATTTA TCAGATTACA TGTTGGGGGG ACGAGGACTT
GGTCCAGCAG TTACGGCCTT ATCGGCTGGT GCCTCTGATA TGAGTGGTTG GATGCTAATG
GGATTGCCTG GTGCAATGTA TGCAACAGGA TTGTCCAGTA TGTGGATCGC TATTGGTCTC
TTGCTTGGTG CATATGCGAA CTATTTATTA TTAGCACCGC GCTTACGTAC GTATACGGAA
GTAGCAAATG ATTCTATTAC TATACCAGAC TTTTTAGAAA ATCGATTTCA AGATCGTACA
AAAATACTTC GTTTTGTCTC CGCCATTGTT ATTTTAGTCT TTTTTACATT TTATGCGTCA
GCTGGTTTAG TTTCAGGTGG CCGTCTATTT GAAAGTTCAT TTAACTTAGA TTATAAAATT
GGTTTATTTG TAACAGTCGG TGTTGTTGTC GCATATACAC TATTTGGTGG ATTTTTAGCA
GTTAGTTGGA CGGACTTTGT TCAAGGGTGC ATTATGTTTA TAGCTCTTGT TTTAGTTCCA
ATTGTTGCTT TTACAGATAT TGGTGGGGTA GCAGAAACGT TCAATGGGAT CAAGGCTGTT
GACCCGGCTC GTCTAGATTT ATTTAAAGGA ACTACGATAC TAGGGATTAT TTCATTTTTA
GCTTGGGGAC TTGGATATTT TGGTCAACCT CATATTATTG TCCGCTTTAT GGCAATTACC
TCTATTCAAG ATTTAAAAAC TTCGCGAAGA ATTGGTATCG GGTGGATGAG TATTTCTATA
CTCGGTGCGA TGCTTACAGG ACTCGTTGGT ATTGCTTACT ATTCTCAAAG TGATAGTACA
TTAGCAGACC CAGAGATGGT CTTTGTAGCA TTCTCGAATA TTTTATTCCA CCCGTATATT
ACAGGCTTCT TGCTCTCAGC TATTTTAGCT TCTATTATGA GTAGTATTTC CTCACAATTA
CTTGTTATCT CTAGTGCGGT AACGGAAGAT TTCTATAAAA CATTTTTCCG TCGTAACGCA
TCAGATAAAG AACTTGTATG TATCGGAAGG CTTGCTGTTT TAGTCGTCGC AATGATTGCT
GTTGTTTTAG CGTATCATCC AAGTGATACG ATTTTAACCC TTGTTGGTTA TGCATGGGCA
GGATTTGGTT CAGCGTTTGG ACCAGCTATT TTGCTTAGTC TTTATTGGAA ACGAACGACA
AAATGGGGCG TGCTCGCGGG TATGATTGTT GGTGCTGTTA CAGTCATTGC ATGGGTACAG
ATTCCGTTTT TAAAGGAAAT GCTATATGAA ATGGTACCAG GCTTTACTTT CAGTTTATTA
GCTGTTATTA TTGTTAGTAT TTTAACAAAA GAACCTTCAA AAGCTGTACA TCGAGAGTTT
CATGAGATGG AAACAGTTTT GGGACAAGCG ACAGAGTAG
|
|---|
| Protein sequence | MKVEIIISLA IYMAGMLYIG YWSYKKTSDL SDYMLGGRGL GPAVTALSAG ASDMSGWMLM
GLPGAMYATG LSSMWIAIGL LLGAYANYLL LAPRLRTYTE VANDSITIPD FLENRFQDRT
KILRFVSAIV ILVFFTFYAS AGLVSGGRLF ESSFNLDYKI GLFVTVGVVV AYTLFGGFLA
VSWTDFVQGC IMFIALVLVP IVAFTDIGGV AETFNGIKAV DPARLDLFKG TTILGIISFL
AWGLGYFGQP HIIVRFMAIT SIQDLKTSRR IGIGWMSISI LGAMLTGLVG IAYYSQSDST
LADPEMVFVA FSNILFHPYI TGFLLSAILA SIMSSISSQL LVISSAVTED FYKTFFRRNA
SDKELVCIGR LAVLVVAMIA VVLAYHPSDT ILTLVGYAWA GFGSAFGPAI LLSLYWKRTT
KWGVLAGMIV GAVTVIAWVQ IPFLKEMLYE MVPGFTFSLL AVIIVSILTK EPSKAVHREF
HEMETVLGQA TE
|
|---|
| |