Gene Bcer98_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_1911 
Symbol 
ID5345368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2024127 
End bp2024810 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content33% 
IMG OID640839467 
ProductRNA polymerase factor sigma-70 
Protein accessionYP_001375193 
Protein GI152975676 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGCACAA AAGTAATGCC ATTGTTTAAA AATCCTATCG ATATGGATTA TTCAAATAAA 
AATTTTCTTA TTGAGAATTA TGCCGAATTA AAAAGATACT GCATGTTTTT AACAAAAAAC
AAATGGGATG GTGAAGACCT AGCGCAAGAA GCGGTTTGTA AAGTACTGCA AAAATATAAG
GAGGAAGATA TTTGTATGAC GCTTCTATAT AAAATTGCGC GAAATCAATG GTTCGATCAA
TTAAAAGTAA AATCTGTTCA AGAGAAATTA GAGAAGGAAG TAACATTTGA AACACCACAT
GAAATAATTG CTGATTTGCA TGAGATGGCG GAAAAAGTAG TCACTTCGCT AAATGCCCAG
CAAGCTGTCA TTTTTCTGTT AAAAGATGTC TTTCAATATC ATCTATCTGA TATTGCGAAA
ATATGCTCGA TATCAGAAGG AGCAGTGAAA GCTTCGTTAT TTCGGAGTAG AAATAAATTG
AAAATGAGAA ATGAAGAAGA TGGTAACTTA GCTTGGCAAG ATGATGCCAA GGTAGTCGTA
ACAGCGGTTC GTGAACAAAA ACCAGAATTA TTAACAAAAC TTCTTCCAAC TATTCATTTT
ACACATGTAT CTTCTAAAGA GCCGGTGCTA TTGTTCAGTG CGAAAAAATC TTCTTCTTAC
AATTTTATGT TATGTGCAGC TTAA
 
Protein sequence
MCTKVMPLFK NPIDMDYSNK NFLIENYAEL KRYCMFLTKN KWDGEDLAQE AVCKVLQKYK 
EEDICMTLLY KIARNQWFDQ LKVKSVQEKL EKEVTFETPH EIIADLHEMA EKVVTSLNAQ
QAVIFLLKDV FQYHLSDIAK ICSISEGAVK ASLFRSRNKL KMRNEEDGNL AWQDDAKVVV
TAVREQKPEL LTKLLPTIHF THVSSKEPVL LFSAKKSSSY NFMLCAA