| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_1843 |
|---|
| Symbol | secY |
|---|
| ID | 5345618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cytotoxicus NVH 391-98 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009674 |
|---|
| Strand | - |
|---|
| Start bp | 1959506 |
|---|
| End bp | 1960810 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640839404 |
|---|
| Product | preprotein translocase subunit SecY |
|---|
| Protein accession | YP_001375130 |
|---|
| Protein GI | 152975613 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0201] Preprotein translocase subunit SecY |
|---|
| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.019643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGTA CAATTTCAAA TTTCATGAGA GTAGCTGAGA TAAGGCGAAA AATCTTTTTT
ACACTTGCGA TGCTAATTGT TTTTCGGATT GGCACGTTTA TTCCAGTTCC TCATACAAAC
GCAGAAGTTT TAAAAATACA AGATCAAGCT AATGTACTAG GTATGCTGAA TGTATTTGGC
GGAGGAGCTT TGCAGCACTT TTCAATCTTT GCTGTTGGTA TTACACCATA TATTACAGCT
TCCATCATCA TTCAGTTATT GCAGATGGAC ATTATACCTA AATTTACAGA ATGGGCAAAG
CAAGGAGAAA TGGGCCGTAA AAAACTAGCT CAATTCACTC GATACTTTAC AATCATTCTC
GCATTTATTC AAGCCATTGT CATGTCAATT GGCTTTAACA ATATAGCAGG TGGACAATTA
ATTACAAATA CAAGTTGGAC GACTTATCTA TTTATCGCAA TCGTGCTAAC TGCTGGTACT
GCCTTTTTAC TTTGGTTAGG GGAGAAAATT ACTGCAAAAG GCGTCGGGAA TGGGATTTCG
ATACTGATTT TTGCAGGGCT TGTTGCGGCG ATTCCAAACG TTGTAAACCA GATTTATTTA
CAACAATTTC AAAATGCTGG CGATCAACTC TTTATGCATA TTGTCAAAAT AGCATTAATT
GCTTTCGTTA TATTAGTAAT CGTTGTCGGT GTTATTTACA TCCAGCAAGC AATTCGGAAA
ATCCCTATTC AATATGCAAA AGCAGTTTCA AACACCAATC AATATCAAGG AGCAAAAAAC
ACGCATTTGC CTCTTAAAGT AAATAGCGCT GGCGTTATCC CAGTCATCTT TGCTTCTGCC
TTTTTAATGA TGCCCCAAAC AATCGCGCAG CTGTTCCCAA ATTTGAGTGT TTCAAAATGG
ATAGGTGAAA ATTTTAACTC TGCCCATCCA ATTGGAATGT CTCTTTACGT AGGGCTCATT
ATTGCATTTA CATATTTCTA TGCATTCGTT CAAGTTAACC CAGAACAAAT GGCAGAGAAC
TTAAAAAAAC AAAATGGATA TGTCCCTGGC ATTCGCCCTG GTAAAGCAAC CGAACAATAT
GTCACAAGCA TTTTATACCG CTTAACTTTC ATTGGTGCAA TCTTTTTAGG CGCCATCTCG
ATTCTACCAG TCATTTTCTC AAAAATTGCG ACACTACCAC CTTCCGCACA AATCGGTGGG
ACAAGCTTAC TCATTATTGT AGGTGTTGCA TTAGAAACAA TGAAAACATT AGAAAGCCAG
CTGGTAAAGC GTCATTATAG AGGGTTCATA AAGAAAGTGA ATTAA
|
|---|
| Protein sequence | MFRTISNFMR VAEIRRKIFF TLAMLIVFRI GTFIPVPHTN AEVLKIQDQA NVLGMLNVFG
GGALQHFSIF AVGITPYITA SIIIQLLQMD IIPKFTEWAK QGEMGRKKLA QFTRYFTIIL
AFIQAIVMSI GFNNIAGGQL ITNTSWTTYL FIAIVLTAGT AFLLWLGEKI TAKGVGNGIS
ILIFAGLVAA IPNVVNQIYL QQFQNAGDQL FMHIVKIALI AFVILVIVVG VIYIQQAIRK
IPIQYAKAVS NTNQYQGAKN THLPLKVNSA GVIPVIFASA FLMMPQTIAQ LFPNLSVSKW
IGENFNSAHP IGMSLYVGLI IAFTYFYAFV QVNPEQMAEN LKKQNGYVPG IRPGKATEQY
VTSILYRLTF IGAIFLGAIS ILPVIFSKIA TLPPSAQIGG TSLLIIVGVA LETMKTLESQ
LVKRHYRGFI KKVN
|
|---|
| |