Gene Bcer98_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_1376 
Symbol 
ID5345051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp1478932 
End bp1479648 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content38% 
IMG OID640838966 
Productlytic transglycosylase catalytic 
Protein accessionYP_001374692 
Protein GI152975175 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000477614 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATTA GAAATATAGT AAAAGAAGTT CTTTCCTATA AGAAAGGACA AATTCAGCAA 
AAGTTAAGTA GTCCTCAATC TTTTGTAAGC AGTCGTTTTC ATGAAACATT GCAAAGTACT
CCAGTGAAAG AGGTGAAAGC TACTGCGCAG CCTACAAAAG TAGACGAAAT GAGCCAATCG
ACTCAACAAC TTGAGATGTC TGAATCAAAG CAGGTAGCAG AGGTTCAAAC GGCACAAAAA
GAATTTGTGC GCCGTTTCCC AGAAACGAAG AATGAGAGTG TAGACGCGTG GGGATTAACA
AAGAAATATA ATATTCAAAA AATACGTTCT GGAAATGAAG GGAAGTATAT GGATATTATT
GAACGAGTAA GTCGTACATA CGGAGTTCCG AAAACATTAA TTCAAAAAAT GATCGAAGTC
GAATCGGACT TTAATCCGAA AACGGTATCC CACGCTGGTG CGAAGGGATT AATGCAGCTC
ATGCCAGAAA ATGTGAGAGA ACTTGGTGTG CAAAATCCAT TTTCACCAGC GGAAAGTATT
GAAGCTGGGG TAAAAGAGCT CGCTGGGTAT TTGAAAAAAA ATAACGGCGA TCTCGTTTTA
GCGCTTGCTT CTTATAATGC TGGCCCCGGC AATGTAAGAA AGTATGGAGG TGTGCCTCCG
TTTAAAGAAA CAGAAGGATA TATTAAAAAA ATATTAAATA TCGATGTTTC AAAATAA
 
Protein sequence
MMIRNIVKEV LSYKKGQIQQ KLSSPQSFVS SRFHETLQST PVKEVKATAQ PTKVDEMSQS 
TQQLEMSESK QVAEVQTAQK EFVRRFPETK NESVDAWGLT KKYNIQKIRS GNEGKYMDII
ERVSRTYGVP KTLIQKMIEV ESDFNPKTVS HAGAKGLMQL MPENVRELGV QNPFSPAESI
EAGVKELAGY LKKNNGDLVL ALASYNAGPG NVRKYGGVPP FKETEGYIKK ILNIDVSK