Gene Bcer98_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_1008 
Symbol 
ID5344062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp1123862 
End bp1124707 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content35% 
IMG OID640838602 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001374329 
Protein GI152974812 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAG GGAAACTACT CGCATTACCT ACAGTTGCAT GGCTCTTAAT TTTCTTTTTA 
TTTCCGCTCT TATTTGTATT AGCATTTGCA TTCTTCCAGC GCGGTGCGTA CGGCACAGTG
GAAATGCAAT TTACATTTGA TAATATAGTA CGCGTCTTTG ATTCGCTATA TATGAGTACA
TTATGGGAGA CAGTGAAGAT TGCTGTTATT ACAACGGTGC TTTGCTTACT AATTGGATAT
CCATTTGCAT ATACAATCAC GATTGTAGAT CGTAAATATC GTTCTATTCT TTTATTATTG
GCAACAATTC CGTTTTGGAT TAACTTCCTT GTCCGTTCAT ACGCATGGAT TGTTATTTTA
CGTTCACAAG GTCTTGTGAA TACAGTATTA CTAAAATTAG GCATTATTCA TGAACCATTA
AATTTATTAT ATAATACACC ATCTGTAATA TTAGGTATGG TTTATTCTTT ATTACCATTT
ATGATTTTAC CGGTGTATGC AGCGATTGAA CAGTTTGATA AACGCAAGTT AGAAGCAGCG
TATGACTTAG GCGCAACGCC AATTAAGGCA TTTTGGCATG TGACACTTCC AATGACAATG
TCAGGAGTTG CAACGGGTTC CATTTTAGTG TTTGTTTCAT CTATTGGTAT GTTTGTCGTA
TCGGATGTAA TGGGTGGATC GAAAGTAGCA TTAATTGGAA ACGTAATTCA AAACCAATTT
TTAGGTGCAC GTGATTGGCC ATTTGGTTCT GCATTATCGA TTATTGTCGT CCTATTCTCT
GTTCTATTAA TTTACTTATA TTATCGTGCG ACGAAAGTAT ATAAATATGG AAACGGAGGG
GAATAG
 
Protein sequence
MKKGKLLALP TVAWLLIFFL FPLLFVLAFA FFQRGAYGTV EMQFTFDNIV RVFDSLYMST 
LWETVKIAVI TTVLCLLIGY PFAYTITIVD RKYRSILLLL ATIPFWINFL VRSYAWIVIL
RSQGLVNTVL LKLGIIHEPL NLLYNTPSVI LGMVYSLLPF MILPVYAAIE QFDKRKLEAA
YDLGATPIKA FWHVTLPMTM SGVATGSILV FVSSIGMFVV SDVMGGSKVA LIGNVIQNQF
LGARDWPFGS ALSIIVVLFS VLLIYLYYRA TKVYKYGNGG E