Gene Bcer98_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0541 
Symbol 
ID5345140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp619386 
End bp620213 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content36% 
IMG OID640838134 
Productextracellular solute-binding protein 
Protein accessionYP_001373885 
Protein GI152974368 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGA TGAAAAAATG GTTCACTCTT ATTGTTTTTG TGTGCTTATT TACTTTGATT 
GTTGCAGGAT GTGGAAATAA ACAAGAAGAG GCGAAAGAAA CAAGTACAAG TGGCGGAGTG
GTCGAACAAA TTAAGAAACG CGGAAAGTTA GTAGTTGGTG TAAAGAATGA TACTAATTTA
TTTGGATTAA AGAACCCTTC AACAGGGCAA GTAGAAGGGT TTGATGTTGA TATGGCAAAA
GCACTTGCAA AAAGGATTCT TGGTGATGAG AAGAAACTAG AACTAAAAGA AGTAACTTCG
AAAACGCGTA TTCCAATGCT GAAAAATGGA GATATTGATG CGATTATTGC GACAATGACA
ATTACAGAAG AACGGAAAAA AGAAGTGGAT TTTTCAGATG TATATTTTAA AGCAGGTCAA
TCATTGCTTG TGAAAAAAGG AAGCGATATT AAAAGTATTG ATGATGTGAA AAAAGGGGTA
AAAGTATTAG CGGTAAAAGG ATCCACATCA ACACAAAATG TTCGTCAAAA AGCACCGGAG
GCAACCGTAT TAGAATTCGA AAATTATAGT GAAGCATTTA CAGCATTAAA GGCGGGACAG
GGAGATGTCT TAACGACTGA TAATGCAATT TTATATGGAA TGGCCAAACA AGATGCGAAT
TATGAAGTAG TGGGTAAGAT CTTTACGAAT GAGCCATACG GCATTGCCGT TCAAAAAGGA
GCAACGGATT TAACGAAAGA GATCAATGAT TTGTTAAAAG AAATAAAAGA AAATGGAGAA
TATGACAAGT TATACGAGAA ATGGATTGGG GAAAAGCCAG AAAAATAG
 
Protein sequence
MKRMKKWFTL IVFVCLFTLI VAGCGNKQEE AKETSTSGGV VEQIKKRGKL VVGVKNDTNL 
FGLKNPSTGQ VEGFDVDMAK ALAKRILGDE KKLELKEVTS KTRIPMLKNG DIDAIIATMT
ITEERKKEVD FSDVYFKAGQ SLLVKKGSDI KSIDDVKKGV KVLAVKGSTS TQNVRQKAPE
ATVLEFENYS EAFTALKAGQ GDVLTTDNAI LYGMAKQDAN YEVVGKIFTN EPYGIAVQKG
ATDLTKEIND LLKEIKENGE YDKLYEKWIG EKPEK