Gene Bcer98_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0409 
Symbol 
ID5344890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp464966 
End bp466546 
Gene Length1581 bp 
Protein Length526 aa 
Translation table11 
GC content40% 
IMG OID640837990 
Producttartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit 
Protein accessionYP_001373760 
Protein GI152974243 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain 
TIGRFAM ID[TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTT CATCTAACGA CGTTTTGGTA GCGTTCACAA TTGAGGGGGA AGTAACAATG 
GAAAAGCTTC AAGAAAGCAT GTATCAACTT ATTGTTGAAA CGTCGACGAA TTTACCAAAG
GATGTTCGTC GTGCAATTCA ACAAGCAAAG GAACGAGAGA ATGCAGGGAC TCGTTCCGCG
ATGGCACTTG GCACAATTAC AAAGAATATT AAAATGGCAG ATGACAACAT TTCGCCAATT
TGCCAAGATA CAGGGATGCC AACATTTAAA ATCTATACAC CAGTTGGTGT GAATCAATTA
AAAATGAAAG AAGCTATCTA TAGTGCGCTT GAGCAGGCGA CCAAGGATGG AAAATTACGT
CCGAACTCTG TCGATTCCCT TTTTGGAGAC AACAGTGGAA ACAACTTAGG GCCCGGAACA
CCTGTTATCA AATTTGAACA GTGGGAAAAA GATTATATCG ATGCTCGTTT AATTTTAAAA
GGAGGCGGCT GTGAAAATAA AAATATTCAA TATAGCTTGC CTTGCGAACT AGAAGGGCTT
AGACGAGCAG GACGTGATTT AGAAGGGATT CGTAAATGTC TTCTTCATGC GGTATATCAA
GCACAAGGAC AAGGATGTAG TGCAGGTGTA ATTGGTGTCG GTATCGGGGG AGACCGCACG
TCGGGATATG AATTAGCTAA AAATCAATTA TTCCGTCCAT TAGATGATGT GAATCCAATT
CCAGAATTGC AGAAATTAGA AGAATATGTA TTAGAGAATG CTAATAAACT TGGGATTGGT
ACAATGGGAT TTGGTGGAGA AACGACTTTA CTTGGTTGTA AAATTGGAGT ATACAATCGT
TTGCCAGCGA GCTTCTATGT GTCTGTAGCA TATAATTGTT GGGCATATCG CCGTCTTGGT
GTAACACTTC ACCCAGCAAC AGGTGAAATT ATCGAGTGGT TATATCAAGA AGGAGAAGAT
ACGCTTCAAC AAGAGGTTGT ACAAGAAAAA CAAGAACAAC GTGAAATCGT ATTACAAGCC
CCAATTACAG AAGAACAAAT TCGTGAACTG CGCGTTGGGG ATGTTGTAAC AATTAACGGT
ATGATGTACA CAGGTCGTGA TGCGATTCAT AAACATTTAA TGGATCATGA CTGCCCTGTA
GATTTAAATG GTCAAATCAT CTATCATTGT GGGCCAGTTG TAGTGAAAGA TGAAAATGAG
AACTGGAAAA TTAAAGCGGC AGGCCCAACA ACAAGTATCC GTGAAGAACC ATATCAAGGA
GATATTATGA AGAAATTCGG TATCCGTGCA GTCATTGGTA AAGGTGGTAT GGGTGCAAAG
ACATTAGCTG CACTGAAAGA ACATGGCGGT GTCTATTTAA ATGCAATTGG CGGTGCTGCG
CAGTATTATG CCGAATGTAT TAAAGAAGTA AAAGATGTAG ATTTTCTACA GTTTGGTATT
CCAGAAGCAA TGTGGCATTT ACGCATTGAT GGTTTTAAAG CAGTTGTAAC AATGGATTCT
CATGGTAATA GCTTGCATGC TGACGTGGAT AAAACATCAC TTGAAAAGTT GGCGGAGTTC
AAAGAACCGG TATTTAAATA A
 
Protein sequence
MKFSSNDVLV AFTIEGEVTM EKLQESMYQL IVETSTNLPK DVRRAIQQAK ERENAGTRSA 
MALGTITKNI KMADDNISPI CQDTGMPTFK IYTPVGVNQL KMKEAIYSAL EQATKDGKLR
PNSVDSLFGD NSGNNLGPGT PVIKFEQWEK DYIDARLILK GGGCENKNIQ YSLPCELEGL
RRAGRDLEGI RKCLLHAVYQ AQGQGCSAGV IGVGIGGDRT SGYELAKNQL FRPLDDVNPI
PELQKLEEYV LENANKLGIG TMGFGGETTL LGCKIGVYNR LPASFYVSVA YNCWAYRRLG
VTLHPATGEI IEWLYQEGED TLQQEVVQEK QEQREIVLQA PITEEQIREL RVGDVVTING
MMYTGRDAIH KHLMDHDCPV DLNGQIIYHC GPVVVKDENE NWKIKAAGPT TSIREEPYQG
DIMKKFGIRA VIGKGGMGAK TLAALKEHGG VYLNAIGGAA QYYAECIKEV KDVDFLQFGI
PEAMWHLRID GFKAVVTMDS HGNSLHADVD KTSLEKLAEF KEPVFK