Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_0286 |
Symbol | ligA |
ID | 5344721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | + |
Start bp | 328785 |
End bp | 330794 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640837874 |
Product | NAD-dependent DNA ligase LigA |
Protein accession | YP_001373644 |
Protein GI | 152974127 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAG AGGCGGTACA ACAGCGTATA GAAGAACTTC GTGATCTTTT AAATACATTT AATTATCAAT ATCACGTATT AGACAATCCT TCTGTTTCTG ATGCGGAATA TGACCGCAAT ATGCAGGAGC TTATAAAATT AGAAACAGAA AACCCAGAAT TTATAACGGA AGACTCTCCC TCTGTTCGTG TTGGGGGAGC TGTCCTTGAT ATATTTGAAA AGGTAACGCA TAAATCACCG ATGTTAAGTT TAGGAAATGC ATTTAATGAA GGGGATTTAC GTGATTTTGA TCGCAGAGTT CGTCAAGGAA TTGATGGTGT AAATGTAAGA TATATTTGTG AATTGAAAAT TGACGGCCTT GCAGTTTCTC TTCACTATGA AAAAGGCCGC TTTATTCAAG GTTCAACACG AGGCGATGGT ATTACAGGCG AAGATATTAC ACAAAATTTA AAAACGATTA AGGCGATTCC TTTACGTTTG CAAGAAGAAG TAACGTTAGA AGTGCGAGGC GAGGCTTATA TGCCGAAGCG TTCATTTGTA AAATTAAATG AAGAGAAAGA GCAAAATGGC GAAGCTGTAT TTGCGAATCC TCGTAACGCA GCAGCAGGGT CTTTACGTCA ACTGGATCCA AAAATCGCAG CAAAACGTAA CTTATCTATG TTTGTATATG GACTAGCTGA TATAGAAGGA AAAACAATTA CATCTCATAG TGAAGCACTA GATTTCTTAG GAGAGCTAGG GTTTAAAACA AATCCGAATC GTCGCATCTG TGAGACAATT GAAGAAGTAA TTGCTTATGT AGAAGAATGG CAAGAAAAAC GTCCAAATCT TGATTATGAA ATTGACGGTA TCGTAATTAA AGTAGATGAT GTAACATTGC AAGAACGTTT AGGAACGACT GCGAAGAGTC CAAGGTGGGC AATCGCTTAT AAATTCCCAG CTGAAGAAGT TGTAACACGA TTAACTGGTA TCGAACTAAG TGTAGGACGT ACAGGGGTTG TAACACCAAC TGCAGAACTT GAACCAGTGC GAGTAGCTGG GACGATTGTT CGCCGTGCTT CTTTACATAA TGAAGATTTA ATTCGGGAAA AAGACATTCG CATTGGCGAT TATGTCGTTG TGAAGAAGGC GGGCGATATT ATTCCTGAGG TTGTGAATGT TGTTTTCGAT AAACGAACTG GTAAAGAAGA AGCATACCAT ATGCCAACGC ACTGTCCTAC TTGTGATAGT GGGCTTGTCC GCTTAGAAGA AGAGGTGGCT CTTCGCTGCA TTAATCCAGC TTGTCCAGCT CAAATTCGTG AAGGATTAAT CCACTTTGTA TCACGTAATG CGATGAATAT TGATGGGCTA GGAGAACGCG TTATCACACA GCTATTTGAA GCAAATTATA TTCGAACATT TGCGGACCTA TATGGTTTAA CGAAAGATCA GTTACTCCAG CTTGATCGCT TTGGTGAAAA ATCAGCTTCT AATTTAGTAC AAGCAATTGA AGCTTCGAAA GAAAACTCAT TAGAACGATT GTTATTTGGA TTAGGTATTC GCCATGTTGG AGCAAAAGCA GCACGAACAT TAGCTGAACA TTTTGAAACG ATGGATAATC TTGTGAAAGC TGGGGAAGAA GAATTAAAGG CGATTAATGA GATCGGTGAA AAAATGGCGC AATCTATTGT TACGTACTTT GATAATGAAG ATGTACTACA CTTAATTCAA CAGTTTAAAG ACTATGGCGT TAATATGACA TATAAAGGTA TAAAGCGTGC TGATTTGCAA AATATCGCAT CTTACTTTGC TGGAAAAACA GTTGTATTAA CAGGTAAACT AGAAGTTATG GGACGAAGTG AAGCAAAGAA AAAAATTGAA GCATTAGGCG GAAAAGTAAC GGGTAGTGTA AGTAAAAGTA CTGACCTTGT CATAGCAGGT GAAGCGGCTG GATCGAAATT AGCACAGGCA GAGAAACATA ATATTGAAAT TTGGAATGAA GAGAGGTTCT TACAAGAGCT GAATAAGTAA
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Protein sequence | MSKEAVQQRI EELRDLLNTF NYQYHVLDNP SVSDAEYDRN MQELIKLETE NPEFITEDSP SVRVGGAVLD IFEKVTHKSP MLSLGNAFNE GDLRDFDRRV RQGIDGVNVR YICELKIDGL AVSLHYEKGR FIQGSTRGDG ITGEDITQNL KTIKAIPLRL QEEVTLEVRG EAYMPKRSFV KLNEEKEQNG EAVFANPRNA AAGSLRQLDP KIAAKRNLSM FVYGLADIEG KTITSHSEAL DFLGELGFKT NPNRRICETI EEVIAYVEEW QEKRPNLDYE IDGIVIKVDD VTLQERLGTT AKSPRWAIAY KFPAEEVVTR LTGIELSVGR TGVVTPTAEL EPVRVAGTIV RRASLHNEDL IREKDIRIGD YVVVKKAGDI IPEVVNVVFD KRTGKEEAYH MPTHCPTCDS GLVRLEEEVA LRCINPACPA QIREGLIHFV SRNAMNIDGL GERVITQLFE ANYIRTFADL YGLTKDQLLQ LDRFGEKSAS NLVQAIEASK ENSLERLLFG LGIRHVGAKA ARTLAEHFET MDNLVKAGEE ELKAINEIGE KMAQSIVTYF DNEDVLHLIQ QFKDYGVNMT YKGIKRADLQ NIASYFAGKT VVLTGKLEVM GRSEAKKKIE ALGGKVTGSV SKSTDLVIAG EAAGSKLAQA EKHNIEIWNE ERFLQELNK
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