| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_4458 |
|---|
| Symbol | |
|---|
| ID | 5383001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009669 |
|---|
| Strand | - |
|---|
| Start bp | 947 |
|---|
| End bp | 3481 |
|---|
| Gene Length | 2535 bp |
|---|
| Protein Length | 844 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640837147 |
|---|
| Product | putative GAF sensor protein |
|---|
| Protein accession | YP_001372987 |
|---|
| Protein GI | 153011774 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTGT CCGAACCTGT CAATCTCACT AATTGTGACC GCGAACCAAT CCACATTCCA
GGTTCGATCC AACCGCACGG CGCAATGCTG GTTATGGATC AGTCTGGCCA AAATCTCCTT
TTTGCTTCTG CCAATATTCC ATGCATAACG GGCTATAGAG GGGATTTGAT CCCTGGCATC
GCCATTTCTT TGATTGTTGG CGAGAAAAAT GCCCATGATT TCCGTAATGC AGCCGCAAAA
GCGAGAGAGC CGGGCTTGTC ATCTGTCGTA CTTGGCCTGC GCTTTCCAGG CAAATCCCTG
CTCTTTGACG CTGTGATCCA TACACACAAG GGAAGAACAT TCGTCGAAAT AGAGCCCTGC
GCGGATCGTG GGCAAAGTGC CCGTCAGGCG CTTGATCTCA CACGCAGCGT CATTCATCGC
ATTGGTCGCG AGGAAACGGT AGACAAAGCT GCAGCAACGG GCGTGCGCCT TGTAAGAGCA
ATGCTGGGTT ACGACCGCGT GATGGTTTAT CGATTTCTCC ATAATGGAGC CGGTCGCGTC
ATCGCAGAGG CAAAGTCTCC CATGCTTTGC AGCTTTATGG GACAACATTT TCCGGCGTCG
GATATACCGG TTCAAGCCCG GCGTCTTTAT CTTATCAATA CAATAAGGAT GATTTCCGAC
ACGTCCTATC AGCCGATCGC ACTTTGTCCC TCACTGGCGG CAGACGAACC CGCTGTCGAC
ATGTCCTTTG CACAGTTGCG TAGTGTTTCC CCGATCCATT GCCAGTACCT GCAGAATATG
GGTGTCTCCG CTTCGTTGTC GATTTCGATT GTCGTTGATG GAGCATTATG GGGCCTGATA
TCTTGTCATC ACGACAGCCC TAAAGTCACC CCTCTTCCCC TACGCATAGG CGCTGAACTG
TTCGGGCAGT ATTTTTCGTT ACATATTGCC GATTGTGAAA GACGCAAAAC ATTGCAACTC
ACCGCGGACG CACGAGAAAA GCTCGACGCG ATCGTATCCC AATTAAGCAT CAGTGACGAA
ATTCGCGAGA GTCTGGGGGC ACAACTCAGC CGGTTTTCCG AATTGGTTGG CGGCAACGGA
GCTGCATTAT GGATGAATGG GCAATGGCTT CAAAGTGGCG ACGTACTCAA CGAACATCAA
ACTCGCCAAG TGCTCGAAAC CGCAAGCCGT CAATCACGAC GCGAGCTTTG GGCAAGTCAG
GAAATCAGGG CCCACTTGGC CGATTATGCC GGAAGCGTTG CAGGCCTGCT GGCAATACCA
CTTTCGATGG CGTTCAATGA TTATCTTGTT TTGTTCCGCA ACGAAGAGGC GCACGCTATC
GAATGGGCGG GCGAGCCGGT GAAAACCACC GTTGAAACGC CTTTCGGCCC CAGATTAACG
CCGAGAGGCA GCTTTGATAC CTGGCGGGAA GAAGTTCGCG GGCGTTCAAC GCCCTGGACA
GCAACAGACC TTTCGGTAGC TCAGTCGATT GGCACCTATT TGCGTGACGT TAAACTTCGG
CAAAATGAGT TGTCTGAACA GGAAAGAGCG AAAACCGAAC AGCGACGCCA GGTGTTAAAC
GCCGAACTCA ATCATCGTGT GAAAAATATT CTTTCTCTGG TGAAGTCAAT CGCGCTTCAG
ACGGGAGCTA ACGCGACAAA TGTTGCTGAT TACGCTCAAA CGCTTGAAGG ACGATTACGT
GCGCTCGCAT CGGCACACGA CCTGTCTTTG GACGGCAAAA ACGGCGGTTC GCTAGCAGAT
TTGCTCAAAA CCGAGGTCAA CCTTTATGGT GATGCCCCTG GTCGCATAAC TCTGGAAGGT
CCACCGGTTC ATCTCGATCA ACGCGCATTC AGCGTTATCG CCATGGTCTT TCACGAGATG
ATAACAAATG CGGCGAAGTA TGGCGCGCTT TCAATTCCAC AAGGACGCCT GACTATCAGG
TGGAAACAGC AAGCCTCCGG CGACTGCGAG ATTTTCTGGA GCGAGACCGA AGGGCCATCC
GTTACTTGGC CCTCACAGAC CGGATTCGGT AGCAAGCTAA TTCGAAATTC TTTTGAGTAC
GACCTCCGCG GAAAAGCCAA GATCGAATAC CACCGGGATG GACTTCGGGC ACAGTTTTCT
GTTCCATCTG TATATGTGAC GCAATTAAAC GACGAGTTGA TCACGGCAGA TATTCCAAAA
GACATTGTCG AGAAAACCCA CATGAATGGA ATGAAGATTC TGGTCGTCGA AGATCAGAGC
CTGATCGCCC TTGATATGGA AAACACCTTA CGAGAATTGG GCGCGGAGCA TATTCATCTT
GCCTCGAGTG CACCAGAGGC ATTCGAGATC ATTGAACGAT CCAAACCCCA TCTTGCAATT
CTCGATTTTA ATCTGGGAGA CCGTACTTCG GAGAATATCG CCGAATTGCT TCTGAAGCTG
AAAATCCCTT TTCTTTTTAC GACAGGCTAT AGCGACAGGG TGCTCATCCC CGAAAAGCTT
CGCGACGTAA CCATCGTGCG CAAGCCCATA AGCAATTCAG CAGTCGCAGC GGCCATCAAC
TCCGTTCTTG GATAG
|
|---|
| Protein sequence | MDVSEPVNLT NCDREPIHIP GSIQPHGAML VMDQSGQNLL FASANIPCIT GYRGDLIPGI
AISLIVGEKN AHDFRNAAAK AREPGLSSVV LGLRFPGKSL LFDAVIHTHK GRTFVEIEPC
ADRGQSARQA LDLTRSVIHR IGREETVDKA AATGVRLVRA MLGYDRVMVY RFLHNGAGRV
IAEAKSPMLC SFMGQHFPAS DIPVQARRLY LINTIRMISD TSYQPIALCP SLAADEPAVD
MSFAQLRSVS PIHCQYLQNM GVSASLSISI VVDGALWGLI SCHHDSPKVT PLPLRIGAEL
FGQYFSLHIA DCERRKTLQL TADAREKLDA IVSQLSISDE IRESLGAQLS RFSELVGGNG
AALWMNGQWL QSGDVLNEHQ TRQVLETASR QSRRELWASQ EIRAHLADYA GSVAGLLAIP
LSMAFNDYLV LFRNEEAHAI EWAGEPVKTT VETPFGPRLT PRGSFDTWRE EVRGRSTPWT
ATDLSVAQSI GTYLRDVKLR QNELSEQERA KTEQRRQVLN AELNHRVKNI LSLVKSIALQ
TGANATNVAD YAQTLEGRLR ALASAHDLSL DGKNGGSLAD LLKTEVNLYG DAPGRITLEG
PPVHLDQRAF SVIAMVFHEM ITNAAKYGAL SIPQGRLTIR WKQQASGDCE IFWSETEGPS
VTWPSQTGFG SKLIRNSFEY DLRGKAKIEY HRDGLRAQFS VPSVYVTQLN DELITADIPK
DIVEKTHMNG MKILVVEDQS LIALDMENTL RELGAEHIHL ASSAPEAFEI IERSKPHLAI
LDFNLGDRTS ENIAELLLKL KIPFLFTTGY SDRVLIPEKL RDVTIVRKPI SNSAVAAAIN
SVLG
|
|---|
| |