| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_4227 |
|---|
| Symbol | |
|---|
| ID | 5381325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 1651377 |
|---|
| End bp | 1652954 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640836915 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001372756 |
|---|
| Protein GI | 153011542 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAG ATACGACAAT GGGGCCAGTA GCCCCGGCGG ATGACCGCAT CGACCCGAAG
AAGGCCGTAG CCTTTCTGGC CATGGTGTTC GGCATGTTCA TGGCGATCCT GGACATCCAG
ATCGTCTCGG CATCGCTTGC TGAAATTCAG GCGGGTCTGA GTGCCAGTTC CGACGAAATA
TCCTGGGTTC AGACATCCTA CCTGATTGCC GAAGTCATCA TGATTCCGCT GTCGGGCTTC
CTCGGACGCC TGATGTCGAC GCGCGTTCTC TTCACCCTTT CGGCGGCAGG CTTTACCCTC
GCAAGTATGC TCTGTGCGAC AGCGACGAAC ATCGAGCAGA TGATCGTCTA CCGCGCCATT
CAGGGCTTCA TCGGCGGCGG CATGATCCCC AGCGTGTTCG CGGCTGCCTT CACCATCTTC
CCGCCTTCCA AGCGCTCGAT CGTCTCGCCG ATGATTGGCC TTGTGGCAAC GCTTGCGCCT
ACCATCGGCC CCACGGTAGG CGGCTATCTG AGCCACGCCT TCTCCTGGCA CTGGCTGTTT
CTGGTCAATG TCGGTCCTGG CATTCTGGTC ACCATCGCCG CATGGAACCT CATCGACTTC
GACGAAGGCG ACAGTTCGCT CCTCAGCAAG TTCGACTGGT GGGGCCTTGC CGGCATGGCA
GCTTTCCTCG GCTCGATGGA ATATGTGCTT GAAGAAGGCC CGCGTAACGA CTGGCTGCAG
GATGAAGCCA TCTTCATTCT GACCGGCGTC ATGATCATCG GTGGTATTCT CTTCTTCTTC
CGGGCCTTCA CGGCTGAAGA ACCCATTGTG GACTTGCGCG CCTTCAAGAA CGTCAACTTT
GCCTTTGGCT CACTGTTTTC GTTCGTGATG GGCGTCGGCC TCTATGGCCT TACCTATCTT
TATCCACTCT ATCTCAGCAG CATACGCGGC TACGATGCCC TGATGATTGG TGAAGCGCTG
TTCGTCAGCG GCCTTGCCAT GTTCTTCACC GCGCCATTGG CAGGCTTCCT GTCAAACCGC
ATGGATCCGC GTCTGATGAT GATGATCGGC TTCCTCGGCT TTGCGGCAGG CACATGGATG
GTGACCGGCC TCACTGCAGA CTGGGATTTC TACGAACTGC TGCTACCGCA GATCCTGCGC
GGTTGTTCAC TGATGCTTTG CATGGTGCCG ATCAACAATC TGGCGCTCGG CACGCTTCCG
CCTGCTCTGC TGAAAAATGC GTCGGGTCTT TTCAACCTGA CCCGTAATCT GGGTGGCGCT
GTTGGCCTTG CCGTGATCAA CACGATTCTG ACCCGTCGCG GTGACATGCA CTATGAGCGT
CTGGCGGAGC ATGTCCGCTG GGGCAATGCC GAAGCGGAGA AAATGATCGC CAGTCTGACA
GCCAAATACA ATGCGGCTGG CATGGACGGC GCAACAATCG CCATTGCCAA GCTTTCCGGC
ATTGTGCGCC AGCAGGCTAC CCTGCTCTCC TTCATCGATG TGTTCTTCAT TCTCACGATG
ATGTTCTGCT CGCTTGCTGT CTGCGCCGTT ATGCTGCGCA AACCGAAGCA GGTCGCCGGT
GGTGGTGGAG GGCATTAA
|
|---|
| Protein sequence | MAADTTMGPV APADDRIDPK KAVAFLAMVF GMFMAILDIQ IVSASLAEIQ AGLSASSDEI
SWVQTSYLIA EVIMIPLSGF LGRLMSTRVL FTLSAAGFTL ASMLCATATN IEQMIVYRAI
QGFIGGGMIP SVFAAAFTIF PPSKRSIVSP MIGLVATLAP TIGPTVGGYL SHAFSWHWLF
LVNVGPGILV TIAAWNLIDF DEGDSSLLSK FDWWGLAGMA AFLGSMEYVL EEGPRNDWLQ
DEAIFILTGV MIIGGILFFF RAFTAEEPIV DLRAFKNVNF AFGSLFSFVM GVGLYGLTYL
YPLYLSSIRG YDALMIGEAL FVSGLAMFFT APLAGFLSNR MDPRLMMMIG FLGFAAGTWM
VTGLTADWDF YELLLPQILR GCSLMLCMVP INNLALGTLP PALLKNASGL FNLTRNLGGA
VGLAVINTIL TRRGDMHYER LAEHVRWGNA EAEKMIASLT AKYNAAGMDG ATIAIAKLSG
IVRQQATLLS FIDVFFILTM MFCSLAVCAV MLRKPKQVAG GGGGH
|
|---|
| |