| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_4054 |
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| Symbol | |
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| ID | 5381361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | + |
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| Start bp | 1479833 |
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| End bp | 1483006 |
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| Gene Length | 3174 bp |
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| Protein Length | 1057 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640836739 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001372586 |
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| Protein GI | 153011372 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.422503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCC CGCGCTTTTT CGTAGACCGC CCGATCTTTG CGGTTGTCCT CTCTGTCCTG
ATGTTGATTG GTGGAGGGCT CACACTCCTG AAGCTGCCCT TGAGTGAGTA TCCGCAGGTA
ACTCCTCCAA CGGTGCAGGT TACGGCGAAC TATCCGGGTG CCAGCCCTGA AGTGATCACC
GAAACGGTCG CCGCGCCGCT GGAGCAGGTC ATTAATGGCG TGGAGAATAT GCTCTATATG
AGCTCGCAGG CTGCCACCGA TGGACGTATG ACGTTGACCG TGACGTTCCA GCAGGGCACG
GATCCTGACA TGGCGCAAAT TCAGGTGCAG AATCGTGTCT CACGCGCGCT TCCGCGTCTG
CCGCAGGAGG TTCAGCGCAT CGGCGTGGTG ACGCAAAAGA CTTCGCCCGA TATCCTGATG
GTGGTTCATC TCGTATCACC CGATGATCGC TATGATCCGC TCTATCTGTC GAATTTCGCC
ACCTTGCAGG TACGCGACCA GCTTGCGCGT ATCTCGGGTG TAGGCGATGT GCTTGTCTGG
GGGGCTGGTG AATACTCCAT GCGGGTCTGG CTTGATCCGG CGAAAGTGGC CGCCCGCGGT
CTGACCGCTT CGGACGTCGT GGCAGCAATT CAGGAGCAGA ATGCCCAGGT AGCCGCAGGC
TCGGTAGGCC AACAACCAGA TGCCTCGGCT GCACTTCAGG TTACGGTCAA TACACTCGGC
AGGTTATCCA ATGAGGAACA GTTCGGCGAT ATCGTCGTCA AGACCGGCGC TGATGGTCAG
GTTACCCGGT TGCGGGACGT TTCACGAATC GAACTAGGGG CTGACGGCTA TGCTCTACGC
AGTCTTCTCG ATGGAAAACC GGCACTGGCG ATGCAGATCG TCCAGAGCCC CGGCGCCAAC
GCACTTGATG TAGCCAGTGC CATTCGCGGC ACCATGGAAG AACTGCAGAA GGGGTTTCCC
GAAGGGATCG AATATCGCAT TGCCTATGAT CCCACAGTCT TCGTGAAAGC CTCCCTTGAG
GCTGTCGTGA TGACATTGCT TGAAGCCATT GTCCTGGTCG TAATCGTTGT CGTGCTCTTC
CTTCAGACTT GGCGTGCTTC GATCATTCCT TTGGTCGCCG TGCCGATATC GTTGGTCGGC
ACATTCGCCC TCATGTATAT GTTCGGTTTC TCGCTGAACA CGCTATCTCT GTTCGGCTTG
GTGCTATCCA TCGGAATTGT GGTCGATGAC GCTATCGTCG TCGTCGAAAA TGTCGAGCGT
CACATCGCGC TCGGCGAAAC GCCCAAGCAA GCTGCTCGCA AGGCTATGGA CGAAGTGACG
GGACCAATCA TTGCCATTAC GTCTGTGCTC TCGGCGGTCT TTATCCCCTC CGCATTTCTG
TCCGGCCTGC AAGGTGAGTT CTATCGCCAA TTCGCCCTTA CAATCGCAAT TTCGACCATC
CTGTCGGCAA TCAACTCCCT CACACTTTCT CCTGCGCTTG CAGGTGTGCT CTTGAAGCCG
CATCACGGCG ACGTCAAACG TGATCTCCTG ACACGGGTGA TCGACGGTTT GTTCGGCTGG
TTCTTCAGGC TCTTCAACCG GTTCTTCGAC AGTGCATCGA CTGCCTATGT CTGGTCGGTG
CGACGGGCCT TGAGGTTGAG CGCGGTCGTC CTGTTCGTCT ATGCTGGCCT GCTCGGCATG
ACATGGATGG GGTTCCAGAC TGTACCTAGC GGATTTGTTC CGGCTCAGGA CAAATATTAT
CTCGTTGGTA TTGCGCAGCT GCCAACGGGA GCGTCGCTCG ACAGAACCGA GGCGGTGGTT
AAGAAAATGT CGGAGATCGC ACTTGCCGAA CCCGGCGTGG AAAGTGTGGT CGCTTTCCCG
GGGCTTTCGG TCAATGGCAT GGTCAATATC CCGAACGCTG CTGTCATGTT CACGATGCTC
AAGCCCTTTG ACGAACGCAA CGATCCCTCC TTGTCCGCCT TTGCCATAGC AGGCCGCTTG
ATGGGCAAGT TCAGCCAGAT ACCTGATGGT TTTGCCGGTA TATTTCCGCC ACCGCCGGTT
CCTGGCCTCG GTACGACTGG AGGTTTCAAA ATCCAGATCG AAGACAGGGC CGGCCTGGGG
CTTGAAGCGC TTGCCGGGGC GCAAGGGGCA ATCATGGCCA AGGCGATGCA GGCACCGGAA
CTCGCGGGCA TGCTTGCAAG CTTCCAGATG AATGCGCCAC AGGTTCAGGT GGATATCGAC
CGGGTGAAAG CCAAATCGCA AGGTGTGCCC CTCAACACAA TTTTTGAAAC GCTGCAGGTG
AACCTTGGTT CTCTCTATGT GAATGATTTC AATCGTTTTG GCAGGACTTA TCGGGTGGTT
GTCCAGGCAG ATGCGCCTTT CCGGATGCAC CCGGAAGATA TTGGCCGACT GAAGGTGCGC
AACATGGCGG GCGAAATGAT TCCGTTGTCG GCGCTTTTGA CGATCCAGCA TAGTTCGGGA
CCGGATCGTG TCATGCATTA CAACAGCTTT CCATCAGCTG ATATCAGCGG CGGTCCGGCC
CCCGGCTATT CGTTCGGACA GGCAACAGCC GCAATAGAAC GCATCATGAC AGAAACCCTG
CCATCCGGCA TGGCCTTCGA ATGGACGGAG CTCGCCTATC AGGAGAAGCA GGCCGGAAAC
ACGGCAATGT ATATCTTCCC ACTTTCCGTT CTACTCGCTT TTCTCATTCT GGCTGCCCAG
TATAATAGCT GGTCATTACC GCTTGCTGTA TTGCTGATCG CGCCGATGGC TCTCCTTTCG
GCAATTGTCG GAGTCTGGCT TACCGGTGGC GACAACAACA TTTTTACTCA GATCGGTTTC
GTCGTTCTGG TTGGCCTTGC TGCCAAGAAT GCGATCCTGA TCGTCGAGTT CGCGCGAGCG
AAGGAAAATG AGGGCGTCGA TCCGTTAAAT GCGGTGCAAG AGGCGGCACG GCTTCGACTT
CGACCCATCC TGATGACTTC GCTCGCCTTC ATTGCCGGTG TCGTGCCACT TGTGATCGCA
ACAGGAGCGG GTGCCGAAAT GCGGCATGTC ATGGGCATAG CCGTGTTTTC CGGCATGCTC
GGTGTCACGT TGTTCGGGCT GCTCCTGACG CCGATATTCT ACGTCGTGGT GCGAAAACTC
GCATTGCGTC GAGATAAAAA TGTTGCAGGA TCGGCACAAG AACAGAAACC ATGA
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| Protein sequence | MNIPRFFVDR PIFAVVLSVL MLIGGGLTLL KLPLSEYPQV TPPTVQVTAN YPGASPEVIT
ETVAAPLEQV INGVENMLYM SSQAATDGRM TLTVTFQQGT DPDMAQIQVQ NRVSRALPRL
PQEVQRIGVV TQKTSPDILM VVHLVSPDDR YDPLYLSNFA TLQVRDQLAR ISGVGDVLVW
GAGEYSMRVW LDPAKVAARG LTASDVVAAI QEQNAQVAAG SVGQQPDASA ALQVTVNTLG
RLSNEEQFGD IVVKTGADGQ VTRLRDVSRI ELGADGYALR SLLDGKPALA MQIVQSPGAN
ALDVASAIRG TMEELQKGFP EGIEYRIAYD PTVFVKASLE AVVMTLLEAI VLVVIVVVLF
LQTWRASIIP LVAVPISLVG TFALMYMFGF SLNTLSLFGL VLSIGIVVDD AIVVVENVER
HIALGETPKQ AARKAMDEVT GPIIAITSVL SAVFIPSAFL SGLQGEFYRQ FALTIAISTI
LSAINSLTLS PALAGVLLKP HHGDVKRDLL TRVIDGLFGW FFRLFNRFFD SASTAYVWSV
RRALRLSAVV LFVYAGLLGM TWMGFQTVPS GFVPAQDKYY LVGIAQLPTG ASLDRTEAVV
KKMSEIALAE PGVESVVAFP GLSVNGMVNI PNAAVMFTML KPFDERNDPS LSAFAIAGRL
MGKFSQIPDG FAGIFPPPPV PGLGTTGGFK IQIEDRAGLG LEALAGAQGA IMAKAMQAPE
LAGMLASFQM NAPQVQVDID RVKAKSQGVP LNTIFETLQV NLGSLYVNDF NRFGRTYRVV
VQADAPFRMH PEDIGRLKVR NMAGEMIPLS ALLTIQHSSG PDRVMHYNSF PSADISGGPA
PGYSFGQATA AIERIMTETL PSGMAFEWTE LAYQEKQAGN TAMYIFPLSV LLAFLILAAQ
YNSWSLPLAV LLIAPMALLS AIVGVWLTGG DNNIFTQIGF VVLVGLAAKN AILIVEFARA
KENEGVDPLN AVQEAARLRL RPILMTSLAF IAGVVPLVIA TGAGAEMRHV MGIAVFSGML
GVTLFGLLLT PIFYVVVRKL ALRRDKNVAG SAQEQKP
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