Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3808 |
Symbol | |
ID | 5381717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 1205901 |
End bp | 1206674 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640836494 |
Product | extracellular solute-binding protein |
Protein accession | YP_001372343 |
Protein GI | 153011129 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.902335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTCG CTCAGATCAT CGCTACCGCA GGCATCATTC AGGCAGCTCT CTTCACCGGC GCAATGGCTG GAGAAAATCT CGACGCCATC AAGTCGGCGG GCGTTTTAAA GATCGGCACT GAAGGCACCT ACGCGCCGTT CACCTACCAC GACAAGGACA ACAAGCTTGT CGGCTTCGAC GTGGAGATTG GTGAAGCCGT TGCCGCCAAG CTCGGCGTAA AGCCGGAATT CGTTGAAGGC AAATGGGACG GGCTCATCGC TGGGCTTGAT TCCAAACGCT ATGATGCCGT TATCAACCAG GTAGGCATTA CCGAAGAGCG TCAGAAGAAG TTCAACTTCT CCAACCCCTA TATCGTTTCC AAGGTCGTTC TGATCGTCAA CGACAAGGAC GATACGATCA AGGATTTTGC TGACCTTAAG GGCAAGAAGT CAGCACAGTC GCTCACCAGC AATTACGGCA AGCTCGCGAA GGAAGCTGGC GCTGAACTCG TAGCCACAGA TGGTTTCGAC CAGTCGATCC AGCTTGTTCT GACAGGCCGT GCGGATGCGA CCCTTAATGA CAGCCTGTCT TTCCTCGACT TCAAAAAGCA CCAGCCTAAG GCTCCGGTTA AGGTTGTGGC CGAGAAAGAA AATGCCGACG CGTCGGGCAT CATCGTCCGC AAGGGCGACG ATGATCTCGT TACGGCGATC AACAAGGCTC TCGACGAAAT TAAAGCCGAC GGCACCTACG ACAAAATTTC ACAGAAGTAT TTCGGTCAGG ACGTTTCCAA GTAA
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Protein sequence | MKFAQIIATA GIIQAALFTG AMAGENLDAI KSAGVLKIGT EGTYAPFTYH DKDNKLVGFD VEIGEAVAAK LGVKPEFVEG KWDGLIAGLD SKRYDAVINQ VGITEERQKK FNFSNPYIVS KVVLIVNDKD DTIKDFADLK GKKSAQSLTS NYGKLAKEAG AELVATDGFD QSIQLVLTGR ADATLNDSLS FLDFKKHQPK APVKVVAEKE NADASGIIVR KGDDDLVTAI NKALDEIKAD GTYDKISQKY FGQDVSK
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