| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3730 |
|---|
| Symbol | |
|---|
| ID | 5382770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 1115804 |
|---|
| End bp | 1116976 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640836416 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001372265 |
|---|
| Protein GI | 153011051 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TTGCATTCAC CGCGCTTGCG GTCTTTTCAC TCACAGCATC AGCAGCTTAT
GCCGATGTGG TAAAGGTCGG CGTCATTGGT CCATTTTCAG GCCCGTTTGC TCTTCAGGGC
AAGAACTTCA AGGCCGGTAT CGACGCCTAT ATGACAGAGC ACGGCAACAC GATCGGCGAT
GACACTGTCG AGATCGTTTA TCGCGATGTG CCGCAGGCCG ATCCTGCGCA ATCGAAGGCG
CTTGCGCAGG AACTCGTGGT CAAGGAAGGC GTGCAGTATC TTGCTGGCTT CTATTTCACC
CCTGACGCCA TGGCGGTTAC GCCCATTCTC AAACAGGGCA ATGTGCCGAT GGTCGTCATG
AATGCCGCCA CCTCTTCCAT TGTCACGAAG AGCCCTTATG TGGTGCGCAC CTCGTTCACC
ACATGGCAAA CGTCAACCCC GATCGCAAAG GTTGCACTCG ACAAGGGTGT GAAGAAAGTC
ATCTCGGTTG TCAGCGATTA CGGGCCGGGC GTGGATGCGG AAAACGCTTT CAAGGCAGCG
TTCACAGAAG CCGGTGGCGA AGTGGTCGAA GCTATTCGCA TGCCGCTCGC TACGAACGAT
TTCAGTCCTA TCATGCAGCG TATCAAAGAC TCTGGCGCGC AAGGCGTGTT CGCTTTTCTG
CCGTCTGGAC CAACCACGCT CGGTTTCATG AAATCCTATG TCGACAACGG ATTGAAAGGC
TCGGGCATTC AGCTTTTTGC TCCAGGTGAC CTGACACAGG AATCCGATCT TCCCGCACTC
GGAGAAAATG CTCTCGGTGT TCTGACGACT TTCCACTATG CAGTCTCGCA TGACTCGCCA
GAAAACAAGA AGTTTGTCGA GGAAGCTCGA AAGGCCATCG GCAATCCTGT GGAATTGTCC
TTCCCTTCGG TCGGCGCTTA TGATGGCATG CATGTCATCT ACAAGATGAT CGAAGCGACC
AGCGGTGAAA AAGATGCTGA AAAAGCGGTA GAGTCCGTGA AAGGCATGGA ATGGATCAGT
CCTCGCGGCC CTGTATCCAT CGATCCCGAA AGCCGCCATA TGACGCAGAA CATCTATCTG
CGCGAAGTAG CCAAGGCTGA TGACGGCACT TACTATAACA AGGAAATTCA AACCTTCGAG
AAGCAGGGCG ACCCCGGCCT AAAAGCTCAA TAA
|
|---|
| Protein sequence | MKKIAFTALA VFSLTASAAY ADVVKVGVIG PFSGPFALQG KNFKAGIDAY MTEHGNTIGD
DTVEIVYRDV PQADPAQSKA LAQELVVKEG VQYLAGFYFT PDAMAVTPIL KQGNVPMVVM
NAATSSIVTK SPYVVRTSFT TWQTSTPIAK VALDKGVKKV ISVVSDYGPG VDAENAFKAA
FTEAGGEVVE AIRMPLATND FSPIMQRIKD SGAQGVFAFL PSGPTTLGFM KSYVDNGLKG
SGIQLFAPGD LTQESDLPAL GENALGVLTT FHYAVSHDSP ENKKFVEEAR KAIGNPVELS
FPSVGAYDGM HVIYKMIEAT SGEKDAEKAV ESVKGMEWIS PRGPVSIDPE SRHMTQNIYL
REVAKADDGT YYNKEIQTFE KQGDPGLKAQ
|
|---|
| |