| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3640 |
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| Symbol | |
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| ID | 5382760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | - |
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| Start bp | 1017012 |
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| End bp | 1020524 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640836323 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001372175 |
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| Protein GI | 153010961 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTTT TCAGCAAACT AGGTCTCAAG TCCTCCAGCG CACTCGGGGC AAATCGTCAT
ATCGTGATCG ACGGCGTTGC CGACGGTTAC GAGGCGTTCT GTCTCATTCG TCTGGCGGAA
GAGATCGGCG AACGCGGACC GATTATGTAT ATCGTGCGCG ACGGGCAACG CATTGCCGAT
CTGGAGCAGG TCTTGAGTTT CGTGGCGCCG GATATGCCGG TTCTGCATCT GCCTGCTTGG
GACTGCTTGC CTTATGACCG CGTATCGCCC GGCGCAGACG CATCTGCACG CCGACTGGCT
GCACTCAGCG CGCTGTCCGA GCTTAAAAAG ACGCCGCATC CGGCGATCAT CCTCACGACT
GCCAATGCTG TTCTGCAAAA ACTGCCGCCA CAGGCGGCTA TTGCCGAACA GGTGATTTCG
GCGCGTCCCG GCAACCAGCT GGATATGAAC GATCTGGCAT CCCGGCTGGA ACGTAACGGT
TTCGAACGTG TTTCCACCGT GCGCGACATC GGCGAATTTG CAGTTCGTGG TGGTATTCTC
GATCTTTATG CACCCGGCGC GGAAGAGCCG TTGCGGCTTG ATTTCTTTGG CGACACACTG
GAATCGATCC GCGCTTTCGA TCCGGCTTCG CAGCGTACCA CGGGCACACG CAAGGAGTTC
GTGCTCCAGC CGATGAGCGA AATCACGCTT TCGCCGGACA TGATCAGCCG TTTCCGCAAG
AATTACGTCG CGATGTTCGG TGCGCCGCAG CGCGATGACG CGCTTTATCA GGCGATCAGT
GAAGGTCGTC GCTTTGCGGG CATGGAACAT TGGCTGCCGC TTTTCTACGA CAAGCTTGAT
ACCGTCTTCG ACCATGCGGG CAATATGCCG GTGGTTTTCG ACCATCTGGT GCATGAGGCG
CTGACCGAGC GCCATACTAT GGTCGTTGAC CATTACGAGT CGCGGCTGAG ACAGGCGGAA
GGCAAGGAGC CGGGCAGCGA TGCAGTACCC TACAAGCCGG TCAAGCCGGA AGCGCTTTAT
TTAACCCCGT CAGAGGTCGA GAAGCACGCT GAGGCCGGAG GTATGCGCAT CGACCTGACG
CCATTCGGTG CGCCGGAGGT TACGGGGCGG ATAATTGTTC ATGCGGATGT GCATAAGGGC
CGCAGCTTTG CCGAGGAGCG CGCCGCCACC GACGTAAACC TGTTCGAAGC GGTGGTGAAA
CATATTGCCG AACTGCGTGC GTCGGGCAAG AAAGTATTGG TTGCCGCGTG GACGGAAGGT
TCTCTCGACC GTCTTTTGCA GGTTCTTGAC GAGCATGGGC TGGAAAAGAT CGAGTCGGTT
GACCGGCTTT CTACCGTCAA GGCGCTGTCA CGCGACAAGG TGACGGCGGC GGTGCTGGCT
GTCGAAAGCG GCTTCGATGC TGGCGATCTC GTCATCGTGG CCGAGCAGGA TATTCTGGGC
GACCGTCTTA TCCGCCGTTC CAAGCGCCGC AAACGCGATC AGGATTTCAT CTCGGAAGTT
GCCTCGCTAA ACGCTGGCGA TATCGTCGTC CATGTCGATC ACGGTATCGG TCGCTTCATT
GGCCTCAAGA CCATTACCGC CGCTGGCGCT CCCCACGACT GTCTTGAAAT TCACTATGCG
GGCGATGACC GGCTGTTTCT GCCGGTCGAA AATATCGAGC TTCTGTCGCG CTACGGTTCG
GAAAGCTCCG ATGCTGTTCT CGACAAGCTT GGCGGCGGCG CATGGCAGAT GCGCAAGGCC
AAGCTCAAGA AACGCCTGCT TGAGATTGCC GGGCATCTGA TCCAGATCGC TGCCGAACGG
CAGATGCGCG GTGCGCCGGT GATGACGCCG CCAGATGGTC TCTATGCCGA ATTTTCTGCT
CGCTTCCCCT ATGATGAAAC CGACGACCAG CTGACGGCAA TCGAGTCCGT GGCGGACGAT
CTGGCTGCTG GCAAGCCGAT GGATCGCCTG ATCTGCGGTG ATGTCGGCTT CGGCAAGACG
GAAGTAGCCC TGCGCGCTGC CTTCATTGCG GCAATGAGTG GCGTTCAAGT GGCGATAGTC
GTGCCGACAA CGCTCCTGTC GCGCCAGCAT TTCAAGACCT TCTCGAAGCG CTTCCATGGT
CTGCCGATCA ATCTTGCCCA TGCCTCGCGT CTTGTCGGCA CGAAAGAACT TGCGGCTGCC
AAAAAGGGAC TGGAAGAAGG AACGGTCGAT ATTGTCGTCG GCACGCATGC GCTGCTCGGC
AACTCGATCA AATTCAAGAA TCTCGGTCTG CTCATCATCG ATGAAGAGCA GCATTTCGGC
GTTAAGCACA AGGAGCGGCT GAAGGAACTG AAGTCGGACG TGCATGTGCT GACATTGTCC
GCCACGCCGA TCCCGCGCAC TTTGCAGCTT GCGCTAACCG GCGTGCGCGA ACTGTCGCTC
ATCACCACGC CACCCGTCGA TCGTATGGCG GTGCGCACCT TCGTCTCACC GTTCGATCCG
CTCGTCATTC GCGAGACGCT TTTGCGCGAA CGCTATCGTG GCGGCCAGAG TTTCTACGTC
TGCCCGCGCA TTTCCGATCT TGGCGAGATA GAGGAGTTCC TGAAAACGCA CGTGCCCGAA
CTGAAAGTGG CCGTGGCCCA TGGTCAGATG GCGCCGGGCG TGCTCGATGA CATCATGAAC
GCCTTCTATG ACGGCCAGTA TGATGTGCTT CTGTCCACGA CCATTGTGGA ATCCGGTCTC
GATATTCCGA CGGCCAACAC GATGATCGTG CACCGCGCCG ATATGTTCGG TCTGGCACAG
CTCTACCAGC TGCGCGGTCG TGTTGGTCGC TCGAAGCAGC GCGCTTTCGC GCTGTTCACA
CTTCCGGCAG GTAAGATGCT GACGCAGATG GCGGAACGTC GCCTAAAGGT TCTACAGTCG
CTCGACACGC TGGGCGCAGG CTTCCAGCTT GCCAGCCACG ATATGGATAT TCGCGGGGCA
GGCAATCTGC TCGGCGAGGA ACAGTCTGGC CATATCAAGG AAGTCGGTTT TGAGCTTTAC
CAGCAGATGC TGGAAGAAGC CGTTGCGACG CTCAAGGGTT CCGGCGAAGT GGAAGACAGC
CAGTGGTCGC CGCAGATCGC TATTGGCACG GCGGTTATGA TCCCCGAAGC CTATGTGCCG
GACCTGCAAT TGCGCCTCGG CCTTTATCGC CGTCTCGCCG ATCTGGAAGA GCCGCAGGAT
ATAGATGCTT TCGGCGCGGA ACTCATTGAC CGTTTTGGTC CGATGCCGGA TGAAGTGCAG
CACCTGCTCA AGATCGTTTA CATCAAGGCA CTCTGCCGCC GTGCGAATGT CGAGAAGCTC
GATGCCGGTC CGAAGGGCGT GGTCATCCAG TTCCGTCATG CGACGTTCAA CAACCCGGTC
GGGCTGGTGA AAATGATCGG TGAACAGGGC TCCATGGCCA AGATCAGGCC GGATCAGAGC
ATCGTCTTCA TCCGCGACTG GCCGACACCG GAAAAGCGCC TCAACGGTTC TGCCGTCATC
ATGACGCAAC TGGCGAAGAT CGCGGCGGGT TAA
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| Protein sequence | MPVFSKLGLK SSSALGANRH IVIDGVADGY EAFCLIRLAE EIGERGPIMY IVRDGQRIAD
LEQVLSFVAP DMPVLHLPAW DCLPYDRVSP GADASARRLA ALSALSELKK TPHPAIILTT
ANAVLQKLPP QAAIAEQVIS ARPGNQLDMN DLASRLERNG FERVSTVRDI GEFAVRGGIL
DLYAPGAEEP LRLDFFGDTL ESIRAFDPAS QRTTGTRKEF VLQPMSEITL SPDMISRFRK
NYVAMFGAPQ RDDALYQAIS EGRRFAGMEH WLPLFYDKLD TVFDHAGNMP VVFDHLVHEA
LTERHTMVVD HYESRLRQAE GKEPGSDAVP YKPVKPEALY LTPSEVEKHA EAGGMRIDLT
PFGAPEVTGR IIVHADVHKG RSFAEERAAT DVNLFEAVVK HIAELRASGK KVLVAAWTEG
SLDRLLQVLD EHGLEKIESV DRLSTVKALS RDKVTAAVLA VESGFDAGDL VIVAEQDILG
DRLIRRSKRR KRDQDFISEV ASLNAGDIVV HVDHGIGRFI GLKTITAAGA PHDCLEIHYA
GDDRLFLPVE NIELLSRYGS ESSDAVLDKL GGGAWQMRKA KLKKRLLEIA GHLIQIAAER
QMRGAPVMTP PDGLYAEFSA RFPYDETDDQ LTAIESVADD LAAGKPMDRL ICGDVGFGKT
EVALRAAFIA AMSGVQVAIV VPTTLLSRQH FKTFSKRFHG LPINLAHASR LVGTKELAAA
KKGLEEGTVD IVVGTHALLG NSIKFKNLGL LIIDEEQHFG VKHKERLKEL KSDVHVLTLS
ATPIPRTLQL ALTGVRELSL ITTPPVDRMA VRTFVSPFDP LVIRETLLRE RYRGGQSFYV
CPRISDLGEI EEFLKTHVPE LKVAVAHGQM APGVLDDIMN AFYDGQYDVL LSTTIVESGL
DIPTANTMIV HRADMFGLAQ LYQLRGRVGR SKQRAFALFT LPAGKMLTQM AERRLKVLQS
LDTLGAGFQL ASHDMDIRGA GNLLGEEQSG HIKEVGFELY QQMLEEAVAT LKGSGEVEDS
QWSPQIAIGT AVMIPEAYVP DLQLRLGLYR RLADLEEPQD IDAFGAELID RFGPMPDEVQ
HLLKIVYIKA LCRRANVEKL DAGPKGVVIQ FRHATFNNPV GLVKMIGEQG SMAKIRPDQS
IVFIRDWPTP EKRLNGSAVI MTQLAKIAAG
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