| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3560 |
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| Symbol | |
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| ID | 5381400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009668 |
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| Strand | - |
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| Start bp | 930098 |
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| End bp | 931579 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640836242 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001372095 |
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| Protein GI | 153010881 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGACAT CGTTTGTTCG CCTGACTGTA CTGGGAAGTA TCCTGCCATT GCTGGCGGCA
TGCGTCACCG TTGGTCCTGA CTATCAGAAG CCAAATGTGC TGACGCCTGC TGGTTGGAAC
AGCAAGGCTG ACAAGCGTGC CCCTCAATTG GGTGATTGGT GGAAAAACCT GAAAGACCCG
GTTCTGGATC AGCTGATAGC GGACGGAATT GCCGGTAGCC CGGATGTTGC TACTGCGAAG
GCGAAGGTGC GGCAGACCCG CGCCAATTAC ACCTCGGCCG GTGGCGCGCT TTATCCGCAG
TTGGATGGAA GCGGAAGCTT CACGCGATCT GACAGTGGAA CTACTCTTGC CTCCAATCAG
TCGAGCATGG GTTTTAAAAC CCAATGGGAA CTCGATCTTT TCGGCGGCAA CAGGCGCGGT
GTGGAAGCAG CCTACTACAA TGTCGAATCC GCAAATGAGC AATTGCGGGC AGCGCTCATT
ACGCTGATCG GCGACATCGC AACCAACTAT GCAAACTTGC GCGGTGCGCA GGCCAATATT
GCCATTGCGC AGCGCAATGC AGCGTCCCAG CGGCAGACCG TAGCACTGAC ACGCAGCCAG
CTGGAAGCCG GACAAATCTC GCAGGTCGAT CTTTTGAGCG CCGAGACACA GGCCGCATCG
ACTGAAGCCC AGATACCGGG TCTGCGGATC AGCTACGCCC AATATCTCAA TCAGTTGTCA
GTGTTGACGG GCCGGTCTTC TTCGGCACTT GCGAGCGTTC TGGACAAATC ACGTCCGATA
CCCGCGATCC CACGCAAAAT TTCAGCCGGC CTGCCTGCCG ATTTGCTGCT CAGCCGCCCG
GATATCCGCG CAGCGGAACG CGATTATGCA AGTTCAACTG CCAGCATCGG CCAGAAACAG
GCCCTGCTCT ATCCAAGTGT TTCGCTCACC GGCAACATCA ATACGGGTGG CGCCAATTTC
GGTGACCTTG GAAAACTGTC GACAATCAGC TGGGCTTTCG GTCCAAGTTT GAGCGTACCT
GTCTTCCATG GCGGCCAGCT GAATGCGGAC GTCGACGCGG CAAGAGCAGC AAGAGACCAG
GCTTTCATCG CCTATCGCAA AATCATCTTG ACGGCGCTCA GCGAAGTCGA GAATGCCAGC
GTATCGCTCA ACCAGAACCG TTTGCGCACC GCGCAGCTAC AGAAAATCGT TGGCAACAGC
CGCAAGATCA ACGAATTGAC GCTGGAGCAA TATAGAGCTG GCACGAAGAG CTTCGTCGAT
GTGCTGACGG CGCAGCGTGA CCTTCTGAGC GCAGAAACCA ACCTTAGTCA GGCCCGGACC
GATCTGGTCC TGAATTATGT CGCCCTGCAG AAAGCACTGG GTGGTGGCTG GAACGGCATC
ATTGATGTTG CGAAACCTGA AGTCGTTGAC GGCTATACGG GTCCGCGCAT CGTCAAGACC
CCGCCGCTTC CTCCACTGAC AACCGATAAG AGACCACTAT GA
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| Protein sequence | MTTSFVRLTV LGSILPLLAA CVTVGPDYQK PNVLTPAGWN SKADKRAPQL GDWWKNLKDP
VLDQLIADGI AGSPDVATAK AKVRQTRANY TSAGGALYPQ LDGSGSFTRS DSGTTLASNQ
SSMGFKTQWE LDLFGGNRRG VEAAYYNVES ANEQLRAALI TLIGDIATNY ANLRGAQANI
AIAQRNAASQ RQTVALTRSQ LEAGQISQVD LLSAETQAAS TEAQIPGLRI SYAQYLNQLS
VLTGRSSSAL ASVLDKSRPI PAIPRKISAG LPADLLLSRP DIRAAERDYA SSTASIGQKQ
ALLYPSVSLT GNINTGGANF GDLGKLSTIS WAFGPSLSVP VFHGGQLNAD VDAARAARDQ
AFIAYRKIIL TALSEVENAS VSLNQNRLRT AQLQKIVGNS RKINELTLEQ YRAGTKSFVD
VLTAQRDLLS AETNLSQART DLVLNYVALQ KALGGGWNGI IDVAKPEVVD GYTGPRIVKT
PPLPPLTTDK RPL
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