Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_3398 |
Symbol | |
ID | 5382376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 736949 |
End bp | 737731 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640836080 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_001371933 |
Protein GI | 153010719 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.745464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAGAAC GCAATTCTCC CATAACCGAA GCGGAACTGC TCGGCTTTGT CGACGGGCAA TTGTCCGAAG CAGAACATGC GCGCATTGCC GGGCTTCTTG AAAGCAACCC CGAGCAGGCG GCGCTGGCTG CCGAATGGCG CAGACAGAAC GACGGTATCA GGCAACTCTT TTCCGGTTAT GCCAAGGCAA AGAACGACGA TCCCGGAATG ATCCGCTCAG CGGGGATACG CCAGTCGCGC ACCTATCGTA GCGCTGTTGC CGCAGCGGTT CTGGCGGCCT TGTTGATCGG CGCCGCTGGC GGCTTTGCAG GCTCGCGCCT GTTTGCGGAA GTAGAGCCGC AAATAGCGAG CGTGCAAACC CTGCCACAGC AGTCGCAGGC GGCATATCTC ATCTATGCCA GCGAAGTACG GCATCCGGTC GAGGTCTTTT CCAACGAAGA GGCGCATCTT GCGACATGGC TTGGCAAACG GCTCGACATA CCCGACCTTC GTGTTCCCGA TCTCCGCTCG TTGGGCTTCC AGCTTGTTGG TGGACGCCTG TTGCCGGTTG ACGGCAAGGC GGGCGCATTC TTCATGTATG AGGACGAGGC TGGAAAACGG CTTTCGGTGA TCGTCGGTCG CAATCCGGAT AACCGCGATA CGAGCTTCCG TTTTGCTTCA AGCGATGGTG TCGAAACTTT CTACTGGATC GACAGCGATC TTGGTTATGC AGTAAGCGGC GAGATTTCGC GCGAACGCCT GCGGCAGGTG GCGGAAGAAT GCTACCGCCA GTTTCCGGGC TGA
|
Protein sequence | MIERNSPITE AELLGFVDGQ LSEAEHARIA GLLESNPEQA ALAAEWRRQN DGIRQLFSGY AKAKNDDPGM IRSAGIRQSR TYRSAVAAAV LAALLIGAAG GFAGSRLFAE VEPQIASVQT LPQQSQAAYL IYASEVRHPV EVFSNEEAHL ATWLGKRLDI PDLRVPDLRS LGFQLVGGRL LPVDGKAGAF FMYEDEAGKR LSVIVGRNPD NRDTSFRFAS SDGVETFYWI DSDLGYAVSG EISRERLRQV AEECYRQFPG
|
| |