| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3267 |
|---|
| Symbol | |
|---|
| ID | 5382209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 592389 |
|---|
| End bp | 593852 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640835950 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001371804 |
|---|
| Protein GI | 153010590 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.309977 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA AACATTCTCA TCGCGGGCTT GTTGTTGCCG CGATTATGGC AAGCATGGCC
ATGATCGCCG TCGAGGCAAC GATTGTGTCG ACCGCAATGC CGCAGATCGC GGCGCAGCTG
GGCCAGCTCA ATCTCTACTC CTGGGTTTTC TCGTCATTTC TTTTGACACA GACAGCAACG
ACAGTCGTGT TTGGCAAACT GGCCGACATT TACGGGCGCA AGCCGGTGCT TGTTTTTGGT
ATTGCACTGT TCCTGACGGC TTCGGTGCTG GCCGGCTTTG CGTGGTCTAT GCCTTCGATG
ATTGTTTTCC GGCTATTGCA GGGCATTGGG GCAGGGGCGA TCCAGCCTGC GGCGATGACC
GTGGTGGCAG ATCTCTTCCC CGGAGTGCAG CGCAGCAAGG TTCAGGGATA TCTTGCCAGC
GTCTGGGCAT TGTCAGCCGT TGTCGGTCCG TTGCTTGGCA GTCTCATCAT TCACAATTTG
AGCTGGGCCT GGGTATTCTG GATTAATGTG CCGGTCGGTA TTCTGGCGGC ATCGGGCTTT
CTTCTCTTTC TTCATGAGGA GAAGCGGACA AAGCCGGTAT CGATCGATGT GCTTGGCGCA
GCACTTTTCG CCGTCTCCAT CTCCTCCCTG ATGATTGCGC TCACCCTGAT GGAGAGCGCG
GTTTCGCTCG AGGGAATTCT GGCGTTCATT CTCTTTGCTC TTTCGCTGAT TGCCTTCATC
TGGCAGGAAC GTCGCACGAA GGAGCCTATG GTCGCACCGG ACCTGTGGCT GAAACGTCCT
ATCGCTTTCT CCAATCTGGC GGTTTTTCTG GCCAGTATGT CGATCATGGG GCTGACGACA
TTCCTGCCGA TGTATGTACA GACAGTTCTC GACCGTTCTC CTGTGGTCGC GGGCTTTGCC
CTGACCATGT TGTTGCTGGG CTGGCCGTGC GGTGCCACGA TCGCATCACG GCAGTTCACG
CGGTTCGGAT TACGCCCGAT CATGATCGCC GGAAGCATCT GCATTCCGAT TGGCACCTTC
CTGCTTGTCA TGCTGACTCC ATCAAGTTCA GCCACACTGG CTGGAACCGG TTCTCTGATC
ATGGGTTTCG GCATGGGGCT GCTCAACATT GGGGCGCTCA TCCTGACACA GGATAGTGTG
AGTTGGTCGG AGCGCGGCAG CGCCACGGCA TCAAACGTCT TCTCGCGCAA TTTGGGCAGT
ACGCTCGGAG CAGCCATTCT CGGTGCGGTG CTGACCTATG GTCTTGCCAA CGCCAATCAT
GGCGAAGCGA TTACGTCAGA CCAACTTCGG GATCTGTTGA ATGGCGCGGA GATGTTGATA
GATCAGCAGG AGCTTCGGCT AGCGCTTCAA CATGCCCTGC ACGCAACTTT TGTAGCGATG
ATGCTTATCG CCGTTCTGAT CGTGCCAGCC TGCCTTTGTG TGCCGGGGGT GAAAAAGACT
TACGAAGAAA ACGTGGTGAC CTGA
|
|---|
| Protein sequence | MTEKHSHRGL VVAAIMASMA MIAVEATIVS TAMPQIAAQL GQLNLYSWVF SSFLLTQTAT
TVVFGKLADI YGRKPVLVFG IALFLTASVL AGFAWSMPSM IVFRLLQGIG AGAIQPAAMT
VVADLFPGVQ RSKVQGYLAS VWALSAVVGP LLGSLIIHNL SWAWVFWINV PVGILAASGF
LLFLHEEKRT KPVSIDVLGA ALFAVSISSL MIALTLMESA VSLEGILAFI LFALSLIAFI
WQERRTKEPM VAPDLWLKRP IAFSNLAVFL ASMSIMGLTT FLPMYVQTVL DRSPVVAGFA
LTMLLLGWPC GATIASRQFT RFGLRPIMIA GSICIPIGTF LLVMLTPSSS ATLAGTGSLI
MGFGMGLLNI GALILTQDSV SWSERGSATA SNVFSRNLGS TLGAAILGAV LTYGLANANH
GEAITSDQLR DLLNGAEMLI DQQELRLALQ HALHATFVAM MLIAVLIVPA CLCVPGVKKT
YEENVVT
|
|---|
| |