| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_3090 |
|---|
| Symbol | |
|---|
| ID | 5382791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009668 |
|---|
| Strand | + |
|---|
| Start bp | 406620 |
|---|
| End bp | 407552 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640835767 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001371627 |
|---|
| Protein GI | 153010413 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC ACACCAGCAC ATCGTCGGCC CAAACTTCCA ATTCTCTGCG GGGTTGGCTG
ACTGCCCCCG TGCCTACTTC TGCCTTTCAG GCCAATATCC AGCAGTTACG CCGTTCCTGG
TTCAAGCTGA TGGCCAATAC GTCCGCCGTG TTCGGTCTGG CCGTAATCGT GCTTTTGGTA
CTGGTAGCTA TTTTTGCGCC TCTCATCGCG ACGCACGACA TTGGTGCCAA CAATCTCGCT
AACCGGCTTC AACCACCGTC ATGGGGGCAT TTCTTTGGTA CGGACGAACT GGGGCGCGAT
ATTTTCAGCC GCCTTGTCTA TGGCTCGCGC ATCACGCTTT ACATCGTGAC GCTGACTGCT
GTCATCGCTG CGCCTATTGG TCTCGTCGTT GGCACCACCG CAGGCTATAT GGGCGGCTGG
GTTGATACGG CACTGATGCG TATTGTCGAT ATCTTTCTTG CTTTTCCTAG TCTCGTGCTC
GCGCTGTCCT TTGCTGCAGC GCTTGGGCCA GGCATCGAAA ATGCCGTTAT CGCCATTTCG
CTCGCCGCAT GGCCACCGAT AGCCCGTCTT GCACGTGCCG AAACACTGAC CATCCGCTCG
TCTGACTATG TGGCCGCCAT TCGTCTGCAG GGGGCTTCCA CGATGCGGGT AATTACGAAA
CATGTCGTGC CGATGTGCAT TCCGTCGGTG GTGATCCGCA TTACGCTCAA CATGTCTTCG
ATCATTCTGA CGGCCGCCGG CCTTGGCTTT CTCGGTCTTG GCGCACAGCC GCCAAGCCCG
GAATGGGGCG CGATGCTTTC CAGTGGTCGC GAATTCATGA TGACCTCGTG GTGGCTTGCT
GCTGTACCCG GCACTGCAAT CTTGATCGCG AGCCTCGCCT TCAACTTGTT CGGCGACGGT
TTGCGCGACG TTCTCGACCC CAGAAACGGA TAA
|
|---|
| Protein sequence | MNTHTSTSSA QTSNSLRGWL TAPVPTSAFQ ANIQQLRRSW FKLMANTSAV FGLAVIVLLV
LVAIFAPLIA THDIGANNLA NRLQPPSWGH FFGTDELGRD IFSRLVYGSR ITLYIVTLTA
VIAAPIGLVV GTTAGYMGGW VDTALMRIVD IFLAFPSLVL ALSFAAALGP GIENAVIAIS
LAAWPPIARL ARAETLTIRS SDYVAAIRLQ GASTMRVITK HVVPMCIPSV VIRITLNMSS
IILTAAGLGF LGLGAQPPSP EWGAMLSSGR EFMMTSWWLA AVPGTAILIA SLAFNLFGDG
LRDVLDPRNG
|
|---|
| |