Gene Oant_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_3064 
Symbol 
ID5381983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009668 
Strand- 
Start bp376611 
End bp377567 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content54% 
IMG OID640835741 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001371601 
Protein GI153010387 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00195714 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTA CACGCAGGAC AATTGCGCGC GGTTTTGCGA TTGCAGCCGT CTCGGCAACA 
TTGGCAGGCG GTGTTGTCAT GCCAGCATGG GCCGCTGATC TGATCGCAAT CATCACACCA 
TCGCACGACA ATCCATTCTA CAAAGCTGAA GCCGTGGGTG CTGAAGCCAA AGCCAAGGAA 
CTTGGCTACG AAACACTGAT CCTTCAGCAT GACGACGATC CAACCAAGCA GTCACAGCTT 
GTCGATACGG CAATCGGTCG TGGCGCAAAG GCAATCATTC TCGACAATGC TGGCTCGGAA 
GCATCGATTG CCGCCGTTCA GAAGGCCAAG GATGCCAAAG TCCCTTCATT CCTGATCGAC 
CGTGAAATCA ATGCCTCAGG CGTTGCAGTG TCGCAGATTG TTTCCAACAA CTATCAGGGC 
GCGCAGCTCG GTGCGGAAGA ATTCGTCAAG CTGATGGGCG AAGTAGGCAA TTATGTCGAG 
CTTCTCGGTC GCGAATCCGA CCTCAATGCT GGCACCCGCT CCAAGGGCTA TCACGACGTC 
ATCGATGAAT ATCCAGACAT GAAGATGGTT GCGCAGCAGT CGGCCAACTG GAGCCAGACC 
GAAGCCTTCA CAAAGATGCA GAGCATTTTG CAGGCAAATC CCGACATTAA GGGTGTGATT 
TCCGGCAACG ACACCATGGC CATGGGTGCC TGGGCAGCGC TTGAAGCTGC AGGCCGCAAG 
GACGTCATCG TTGTCGGCTT CGACGGCTCC AACGATGTCC GCGACTCCAT CAAGGCCGGT 
GGCATCAAGG CAACGGTTCT TCAGCCAGCC TATGCTCAGG CACAGATGGC TGTCGTTCAG 
GCTGACGAAT TCATCAAGAC CGGTAAGGGC CCTGCTGAAG AAAAGCAGCT GATGGACTGC 
GTCCTCATCA ATCCTGACAA CGCAGACAAG CTCGAAACTT TCGCTTTGAA GGACTAA
 
Protein sequence
MKFTRRTIAR GFAIAAVSAT LAGGVVMPAW AADLIAIITP SHDNPFYKAE AVGAEAKAKE 
LGYETLILQH DDDPTKQSQL VDTAIGRGAK AIILDNAGSE ASIAAVQKAK DAKVPSFLID 
REINASGVAV SQIVSNNYQG AQLGAEEFVK LMGEVGNYVE LLGRESDLNA GTRSKGYHDV 
IDEYPDMKMV AQQSANWSQT EAFTKMQSIL QANPDIKGVI SGNDTMAMGA WAALEAAGRK 
DVIVVGFDGS NDVRDSIKAG GIKATVLQPA YAQAQMAVVQ ADEFIKTGKG PAEEKQLMDC 
VLINPDNADK LETFALKD