Gene Oant_1973 details

Gene Information

• Locus tag: Oant_1973
• Symbol: rpsE
• ID: 5378437
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: +
• Start bp: 2068312
• End bp: 2068872
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640834641
• Product: 30S ribosomal protein S5
• Protein accession: YP_001370518
• Protein GI: 153009303
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.00407796
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACAGA GAGAACGTAA CCGCGAAGAT CGCGGCCGTG AGGAGCGCGA CAGCGAATTC 
GTCGATAAGC TCGTTCACAT CAACCGCGTC GCCAAGGTCG TCAAGGGCGG CCGTCGCTTC 
GGTTTTGCTG CGCTCGTCGT TGTTGGCGAC CAGAAGGGCC GCGTAGGCTT CGGTCATGGC 
AAGGCTCGTG AAGTGCCGGA AGCTATCCGT AAGGCTACGG AAGCTGCCAA GCGCGACATG 
ATCTTCGTAC CGCTGCGTTC GGGCCGTACG CTGCACCACG ATGTTGAAGG CCGTCACGGC 
GCCGGCAAGG TTCTGCTCCG CGCAGCTCCT GCTGGTAAGG GTATCATCGC CGGTGGTCCG 
ATGCGTGCAG TGTTCGAAAC GCTCGGCGTT CAGGACGTTG TCGCCAAGTC GCTCGGTTCG 
TCGAACCCTT ACAACATGGT TCGTGCGACG TTCGATGCTC TGAAGCATCA GATGCATCCG 
AAGGACATCG CTGCACAGCG CGGCATCAAG TACTCGACCC TTCAGGCTCG CCGCCATGAT 
GTGGTCGGTT CGGAAGAGTA G 

 

Protein sequence

MAQRERNRED RGREERDSEF VDKLVHINRV AKVVKGGRRF GFAALVVVGD QKGRVGFGHG 
KAREVPEAIR KATEAAKRDM IFVPLRSGRT LHHDVEGRHG AGKVLLRAAP AGKGIIAGGP 
MRAVFETLGV QDVVAKSLGS SNPYNMVRAT FDALKHQMHP KDIAAQRGIK YSTLQARRHD 
VVGSEE