Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1957 |
Symbol | rplD |
ID | 5380246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 2061190 |
End bp | 2061810 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640834625 |
Product | 50S ribosomal protein L4 |
Protein accession | YP_001370502 |
Protein GI | 153009287 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0135033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCA CGATTACCAC TCTTGAAGGC AAGGATGCCG GCAAGGTCAA GCTGAACGAA GAAATCTTCG GCCTCGACCC GCGTGACGAC ATTCTTCAGC GCGTTGTGCG CTGGCAGCTG GCTCGCCGCC AGCAGGGCTC CCATAAGGCT CAGGGCCGTG GCGACGTAAG CCGCACCGGC GCAAAGATGT ACAAGCAGAA GGGTACGGGT CGCGCTCGTC ACCATTCCGC TCGCGCTCCG CAGTTCCGCG GTGGTGGTCA GGCTCACGGA CCGGTTGTCC GTTCGCACGA TCACGATCTG CCGAAGAAGG TTCGCGCTCT TGGCCTGCGT CATGCCCTGT CTGCAAAGGC AAAGGCATCT GACCTGATCA TCATCGATGA TCTGGCTGCA ACGGAAGCCA AGACGAAGCA GCTTGTTTCG CAGTTCGCCA AGCTCGGTCT TGAAAATGCA CTCGTCATCG GCGGTGCAGA GATCGACGTG AACTTCCAGC GCGCGGCTTC GAACATCCCG AACATCGACG TTCTGCCGGT GCAGGGCATC AATGTTTACG ACATCCTTCG CCGCGGCAAG CTCGTTCTTT CCAAGGCGGC TGTCGAAGCC CTCGAGGAGC GTTTCAAATG A
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Protein sequence | MDLTITTLEG KDAGKVKLNE EIFGLDPRDD ILQRVVRWQL ARRQQGSHKA QGRGDVSRTG AKMYKQKGTG RARHHSARAP QFRGGGQAHG PVVRSHDHDL PKKVRALGLR HALSAKAKAS DLIIIDDLAA TEAKTKQLVS QFAKLGLENA LVIGGAEIDV NFQRAASNIP NIDVLPVQGI NVYDILRRGK LVLSKAAVEA LEERFK
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