Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_1392 |
Symbol | |
ID | 5380031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 1470358 |
End bp | 1471263 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640834051 |
Product | TPR repeat-containing protein |
Protein accession | YP_001369938 |
Protein GI | 153008723 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.800927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGA GGCAGAAGGG CCTTGCGCCC CTATGCGAGC TGAAAGGAAT GCAGTCGTTG CCCACGCGCT TGAAGATGAT GCAATCGTCT GGAACAGGTC GAAACGGCCT TCTCATTGCC GCCGCACTTC TGGCTTTGAC CGTTGCTGGC TGCCAAAGCT CCACAACCAC CGCACTCAGC ACTGTCGATA AGGCGCAGGG GTCGAGCGAG AACATCAGTT CGCTGACAAG CGTGATCCAG AGCAATCCGC GCGATCCGGA AGGCTACAAT GTGCGTGGTT CCGCCTATGG CAAGTCCGGG CGCTACAAGG AAGCGCTGCG CGATTTTGAT CAGGCAATAG CGCTCAATCC GAATTTCTAT CAGGCCTATG CCAACCGCGC GCTGGTCTAT CGCTATATGG GTGACAGCAC CAAGGCCGTG CAGGATTACA GCAAGGCCAT CCAGCTAAAT TCGCAATATG ACGCTGCCTA TATCGGGCGC GGCAATGTCT ATCGTCAGGC CGGTCGTCTT GATCAGGCGC TCAGCGACTT CAATCAGGCT ATTGCCCTGC AGACCACCGA CGGTCGCGCC TACCATAATC GCGGCCTGAT CTATCAGGCC AAGGGCCAGC ACAAGCAGGC CATCGAGGAT TTCTCCAAGG CAATTTCGCT CAATTCCACG GCGCCGGAAC CTTATAACGG TCGCGGCATT TCCTATGTGG CGCTCGGCGA CTACGACAAT GCCTTCGACG ATTTCAACAC AGCCATTACG CTCGATCAGA ATATTGCGGA AAGCTGGGCC AATCAGGCGC TTGTCTACGA GCACAATGGC GACAAGGCCA AGGCTGCAAA TTCCTATTCG CGCGCGGTAC AGCTTGATCC GAAATACCAG CCTGCAAAAG ACGGTCTGGC CCGCACACGC GGATAA
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Protein sequence | MEKRQKGLAP LCELKGMQSL PTRLKMMQSS GTGRNGLLIA AALLALTVAG CQSSTTTALS TVDKAQGSSE NISSLTSVIQ SNPRDPEGYN VRGSAYGKSG RYKEALRDFD QAIALNPNFY QAYANRALVY RYMGDSTKAV QDYSKAIQLN SQYDAAYIGR GNVYRQAGRL DQALSDFNQA IALQTTDGRA YHNRGLIYQA KGQHKQAIED FSKAISLNST APEPYNGRGI SYVALGDYDN AFDDFNTAIT LDQNIAESWA NQALVYEHNG DKAKAANSYS RAVQLDPKYQ PAKDGLARTR G
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