Gene Oant_1344 details

Gene Information

• Locus tag: Oant_1344
• Symbol: def
• ID: 5379351
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: +
• Start bp: 1423769
• End bp: 1424296
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640834003
• Product: peptide deformylase
• Protein accession: YP_001369890
• Protein GI: 153008675
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGTAA AACCGCTTGT CATCCTTCCC GATCCCGTCC TGCGCCAGGT TTCCAAGCCT 
GTGGAGCGCT TTGACGACCA GCTGCGCAAA TTTGCCGGCG ACATGTTCGA CACCATGTAT 
GATGCGCCGG GCATTGGCCT CGCCGCCATT CAGGTAGGCG AACCGATCCG CATGCTCGTC 
ATCGACCTTG CCAAGGAAGA TGAACCGAAA GCGCCGCATG TCTTCATCAA TCCCGAGATT 
GTCGGCGTGA CGGATGAAGT CAGCACCTAT GAGGAAGGCT GTCTTTCGAT CCCGGATTAT 
TATGCCGAAG TGGAACGGCC AGCCGCCATC AAGGTCAATT ACTTCGATGC AGATGGCAAA 
CAGCATCTGA TCGAAGCCGA CGGGCTGATG GCTACCTGCC TGCAGCATGA GATCGATCAT 
CTGAACGGCG TGCTCTTCAT CGATCATATT TCCAAGCTGA AGCGCGATAT GGTCATCAAG 
AAGTTCAAGA AGCTCGCCAG CCAGCGCGCG CCCGGGAAAG TGCTTTAA 

 

Protein sequence

MSVKPLVILP DPVLRQVSKP VERFDDQLRK FAGDMFDTMY DAPGIGLAAI QVGEPIRMLV 
IDLAKEDEPK APHVFINPEI VGVTDEVSTY EEGCLSIPDY YAEVERPAAI KVNYFDADGK 
QHLIEADGLM ATCLQHEIDH LNGVLFIDHI SKLKRDMVIK KFKKLASQRA PGKVL