Gene Oant_1258 details

Gene Information

• Locus tag: Oant_1258
• ID: 5380602
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: -
• Start bp: 1325497
• End bp: 1327455
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640833908
• Product: ABC transporter related
• Protein accession: YP_001369804
• Protein GI: 153008589
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGAAA ATCCCGTAAC TGACACGCCC CTCATCAGAC TGGATGATAT CCGCAAGACC 
TATCACAATG GCGACCTTGC TGTTGAGGTG TTGCACGGCA TCACGCTCGA TATTCAGGCT 
GGAGAGTTCG TCGCGATCAT GGGCGCGTCG GGCTCCGGCA AATCGACGCT GATGAACATT 
CTGGGCTGTC TCGACAGCCC GAGCGGCGGA CAATATCTGC TCGACGGCGA GGACGTCTCG 
ACACTGGATG CCGATGCGCT GGCAGCATTG CGTCGCCGAA CCTTTGGCTT CGTCTTCCAG 
AGCTACAACC TCATCTCGAC CTCGACCGCG CAGGAAAACG TCGAAGTGCC CGCGATCTAT 
GCAGGCCTGC CCGCATCGGA GCGCCATGCG CGTGCCGCCG AATTGCTCAA CTCGCTGAAA 
CTCGGTGACC GCCTCGATCA TCGCCCGAAC CAGCTTTCAG GCGGCCAGCA GCAGCGCGTT 
TCCATCGCCC GTGCACTCAT GAATGGCGGG CGCATCATTC TTGCCGACGA GCCGACAGGC 
GCACTCGACA GCCAGAGCGG CGAAGATGTG ATGGAACTGC TGCGCTCCAT GCACGCGCAG 
GGTCATACCG TCATCGTCAT CACACATGCC CGCGAAGTGG CCGAACGCGC CGACCGGCTG 
ATCGAAATCC GCGACGGCCA GATCCTTTCG GATACGGTAA AACGAGCTAT TCCCGATACG 
CAGGCGCCGT TCCGGTTGCG GGAGAGCCTT GAAGGCAGTT CCGCCCGCAT CGCCGATATT 
TCGGAAGCGG TGAAGATGGC GATGCGCGCC TTGCGGGCCA ACATCTTCCG AACGATCCTT 
ACTCTCCTCG GCATCATCAT CGGCGTCAGT TCCGTTGTGA CGATGCTCGC CATCGGCACC 
GGTGCGCAGA ACTCGATTCT CGACCGCATC AATGCGATGG GCACCGATCT CATTCTGGTA 
CGTCCGTCCA TGGCGGGCTT CCGGGGAACA GGCTCGATAG CGACACTGGT CCCCGAAGAT 
GCCACTGCCA TTCTGGAACT GCCGAACATC AAAACCGCCG TCCCCGAAGT CACCGGCACC 
GTGACGCTGC GGCGTGGCAA TGTCGATTAC CAGTCGCAGG CAAACGGGAC TGTCCCTGCC 
TTTTCCGAAG CCAAATCGTG GAAGGTTGCC ACCGGCGACT TCATCAGCCA GAGCGATCTG 
GACAACTATG CGCCGGTCGC AGTTCTGGGC AAAACGGTCG TCAACACGCT GTTCCCCGAT 
GGCAGCAATC CTATCGGGCA GTATATCCTG ATCCAGAAGA TTCCGTTTCA GGTCATCGGA 
ACATTGGAAC CGAAGGGCGC AGGCTTTGGC GGCTCGGATC AGGACGACGT GGTGATCGTA 
CCGCTCTCCA CCGGCAATCT GCGGCTGTTC GGCCAGAAAT ACGTGCGCAC CATCACGGTG 
CAGGTGAAGG ATTCCGACCT CATCAACACG ACGCAGGAAC AGATTCAGGA CCTGCTCGAC 
CAGCGCCACA AGAAGCAGGA CACGATGATA ACCAACATGT CCTCCATCCG CGAGGATGCG 
ACGGCGATGG GCAATACGAT GACGTTGTTT CTGGGTTCCG TCGCTGCAAT CTCGCTTCTG 
GTCGGCGGCA TCGGGGTCAT GAACATCATG CTGGTGAGCG TGACGGAGCG CACCCGCGAA 
ATCGGCGTGC GGATGGCAAC CGGCGCAAGG CGGCGCGATA TTCTGCTGCA ATTCATCACC 
GAGGCATTGA CCGTATCGGC CATTGGCGGG GCGTTCGGCG TCGTGATCGG ACTGGGCGCT 
GCTGCCGTCG CAGGCTGGGC CGGGCTTTCA GTCGGCTACA GCTTGGGACC CGTCCTGCTG 
GCCTTCGCCT GTGCTTTCGC CACTGGCCTG ATCTTCGGTT TCCTGCCTGC GCGCAAGGCT 
TCTCGCCTGC TCCCGGCTGT GGCACTGTCT TCTGAATAG 

 

Protein sequence

MTENPVTDTP LIRLDDIRKT YHNGDLAVEV LHGITLDIQA GEFVAIMGAS GSGKSTLMNI 
LGCLDSPSGG QYLLDGEDVS TLDADALAAL RRRTFGFVFQ SYNLISTSTA QENVEVPAIY 
AGLPASERHA RAAELLNSLK LGDRLDHRPN QLSGGQQQRV SIARALMNGG RIILADEPTG 
ALDSQSGEDV MELLRSMHAQ GHTVIVITHA REVAERADRL IEIRDGQILS DTVKRAIPDT 
QAPFRLRESL EGSSARIADI SEAVKMAMRA LRANIFRTIL TLLGIIIGVS SVVTMLAIGT 
GAQNSILDRI NAMGTDLILV RPSMAGFRGT GSIATLVPED ATAILELPNI KTAVPEVTGT 
VTLRRGNVDY QSQANGTVPA FSEAKSWKVA TGDFISQSDL DNYAPVAVLG KTVVNTLFPD 
GSNPIGQYIL IQKIPFQVIG TLEPKGAGFG GSDQDDVVIV PLSTGNLRLF GQKYVRTITV 
QVKDSDLINT TQEQIQDLLD QRHKKQDTMI TNMSSIREDA TAMGNTMTLF LGSVAAISLL 
VGGIGVMNIM LVSVTERTRE IGVRMATGAR RRDILLQFIT EALTVSAIGG AFGVVIGLGA 
AAVAGWAGLS VGYSLGPVLL AFACAFATGL IFGFLPARKA SRLLPAVALS SE