Gene Oant_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_1117 
Symbol 
ID5379304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp1171312 
End bp1172427 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content55% 
IMG OID640833769 
Productextracellular ligand-binding receptor 
Protein accessionYP_001369666 
Protein GI153008451 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.9327e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT CACTTTTCTC AGGCGTTGCT CTTGCAGCAG TTATGGCTTT CGGGGGCTCG 
GCTTGGGCTG ATGTTCTTGT CGGTATTGGT GCGCCACTGA CGGGCCCAAA TGCCGTTTAC
GGTGCGCAGA TCCAGAAGGG CGCGGAAGCG GCCATCAAGG AAATCAACGA TGCGGGCGGC
ATCAACGGCG AAAAAATCGC GATCACTCTC GGCGATGACG TATCGGATCC GAAGCAGGGT
ATCTCGGTTG CCAACAAGTT CGCAGCTGAT GGCGTGAAAT ACGTTATCGG TCACTTCAAT
TCGGGCGTTT CGATCCCGGC TTCGGACGTT TATGCCGAAA ACGGCATTCT CGAAATCTCG
CCTGCTGCGA CCAACCCGGT CTATACAGAG CGCCAGCTCT GGAACACGTT CCGTACCTGC
GGTCGCGACG ATCAGCAGGG CATCGTGGCC GGTCAGTATA TTTTCGACAA TTTCAAAGAC
GGGAAAATTG CCGTCATTCA CGACAAGACC CCTTATGGTC AGGGCCTTGC CGATGAAACC
AAGAAGAAGC TCAACGAGCT TGGCGTCAAG GAAGCCGTCT ATGAAGGCGT GAATGTTGGC
GAGAAGGATT TCTCGGCTCT GATCGCCAAA CTGAAACAGC AGGGCGTTAC GGTCCTTTAT
TGGGGTGGTC TGCACGCTGA AGCCGGTCTG ATTATCCGTC AGCTTGCCGA TCAGGGGCTG
AAGGTCCAGT TTATCTCTGG CGACGGTATC GTTTCCAACG AGCTGGCCTC CATCGCAGGC
GATGCGGTTG CCGGTACGCT GAATACGTTT GGCCCAGACC CGCGCAATAA CCCGAACAAT
GCCGATTTGG TGAAGAAGTT CCGCGATGCT GGCTTCGAAC CGGAAGCCTA CACGCTTTAC
TCTTACGCTG CCGTTCAGTC TCTGGCTGGG GCTGCGAAGG CTGCCGGAAG CAACGACCCG
CAGGAAGTTG CCAAGGCGCT TAAGGAAAAG GGTCCGTTCA AGACCGTGCT TGGCGACCTG
TCCTATGACG AAAAGGGCGA TCCGAAGCTT CCAGGCTATG TCATGTACAA GTGGGAAAAG
GGCGCTGACG GGAAATATAC TTACATTCAG CAGTAA
 
Protein sequence
MKKSLFSGVA LAAVMAFGGS AWADVLVGIG APLTGPNAVY GAQIQKGAEA AIKEINDAGG 
INGEKIAITL GDDVSDPKQG ISVANKFAAD GVKYVIGHFN SGVSIPASDV YAENGILEIS
PAATNPVYTE RQLWNTFRTC GRDDQQGIVA GQYIFDNFKD GKIAVIHDKT PYGQGLADET
KKKLNELGVK EAVYEGVNVG EKDFSALIAK LKQQGVTVLY WGGLHAEAGL IIRQLADQGL
KVQFISGDGI VSNELASIAG DAVAGTLNTF GPDPRNNPNN ADLVKKFRDA GFEPEAYTLY
SYAAVQSLAG AAKAAGSNDP QEVAKALKEK GPFKTVLGDL SYDEKGDPKL PGYVMYKWEK
GADGKYTYIQ Q