Gene Oant_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_1089 
Symbol 
ID5379908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp1139546 
End bp1140907 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content62% 
IMG OID640833741 
ProductFmu (Sun) domain-containing protein 
Protein accessionYP_001369638 
Protein GI153008423 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00563] ribosomal RNA small subunit methyltransferase RsmB 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCA ATGCCGCAGA CCTGCGCCCC GGTCTGGCGG CGCGTTTGTG TGCGGCACGC 
CTTCTTGGCG CGGTAATCGA AAAGAACACC TCGCTCGACG GCCTGACCGA CAATACGCAC
GGCCATCCGC AATATCTGGC GCTGGAGCCG CGCGACCGCG CGCTGGTTCG CGCCATTCTG
GGTTCTGCGC TCCGCAATCG CGGCAGCATC GAACGCGCCA TCAACAAGCG TCTGGACCGG
CCATTGCCGG AAAACGCCGT GGCGCTGAAA CATCTTCTGC ATGTCGCCAT CGCCCAGATT
TTCTATCTCA ATCTGCCCGA TCATTCCGCC GTCGATCTGG CGGTGGAAGC GGCCAATGCC
GATCCGCGCA ATCGCAAATA TGCCGGTCTC GTCAATGCGC TGCTGCGTCG CCTTTCGCGC
AACAAGGAAC GTGCTCTCGC CCACACGCTT GAGCCCGAAA CCAATGTGCC GGAGTGGTTT
GCCAAAAGCA TCACCGACGC CTATGGCGCG GAAAAAGCAG CAGCCATTCT TGCCATGCAT
GCCTATGAGC CGCCGATCGA TTTCACGGTC AAGGGTGACG CAAAGGCATG GGCCGAAAAG
CTCGGTGGCG TCGCACTGCC CAACGGTTCG GTGCGCCTGC AAACGGTCGA AGGCAATCTC
ACCGACCTGC CCGGCTTTGC CGAAGGCGAC TGGTGGGTGC AGGATGTGGC CGCGAGCCTG
CCTGCGCGCC TGATGGGTGA TATCAAGGGC AAACGGGTTG CCGATCTGTG CGCCGCCCCC
GGCGGCAAGA CGGCGCAGCT CGTACTTCAG GGCGCCAATG TGACCGCGCT CGACCTTTCC
GAAAATCGGC TGAAGCGCCT GCGCGGCAAT CTGGAACGTC TCGGCTTCGA GGCGAAGACC
GTTGCCACCA ATCTGATGGA TTTCCAGCCG GACGAACTGT TCGATGCCGT GCTTCTGGAT
GCGCCCTGCT CTTCCACCGG CACTGTGCGC CGTCATCCGG ATGTGCCTTG GACCAAGACG
CCGCAGGACA TAGCAAAGCT TGCCGAACTT CAGGGCAAAC TTTTGGCGCA CGCGGCCACT
CTGGTCAAAC CCGGCGGCGT AATCGTCTTT TCCAATTGTT CGCTGCACCC GCTCGAAGGC
GAGGAAATGG CACGCAAGGC AGCGGAAAAT CCGTTGCTGG AACCTTTCCC GATCACGGAG
CAGGATTGCC CCAGTCTGAA CGGGCTTCTG GATGGGCTGG TCACAGCAGA AGGCTTTCTG
CGATCCACTC CGGCAGACTT GCCGCCGGAT CGTTTTGAAG GCAATCCGCA CATGGCTGGC
ATGGACGGCT TCTTCGCGGC CCGCTTCAAG CGCCGGGCCT GA
 
Protein sequence
MNTNAADLRP GLAARLCAAR LLGAVIEKNT SLDGLTDNTH GHPQYLALEP RDRALVRAIL 
GSALRNRGSI ERAINKRLDR PLPENAVALK HLLHVAIAQI FYLNLPDHSA VDLAVEAANA
DPRNRKYAGL VNALLRRLSR NKERALAHTL EPETNVPEWF AKSITDAYGA EKAAAILAMH
AYEPPIDFTV KGDAKAWAEK LGGVALPNGS VRLQTVEGNL TDLPGFAEGD WWVQDVAASL
PARLMGDIKG KRVADLCAAP GGKTAQLVLQ GANVTALDLS ENRLKRLRGN LERLGFEAKT
VATNLMDFQP DELFDAVLLD APCSSTGTVR RHPDVPWTKT PQDIAKLAEL QGKLLAHAAT
LVKPGGVIVF SNCSLHPLEG EEMARKAAEN PLLEPFPITE QDCPSLNGLL DGLVTAEGFL
RSTPADLPPD RFEGNPHMAG MDGFFAARFK RRA