| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0858 |
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| Symbol | trmE |
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| ID | 5380286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | + |
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| Start bp | 889505 |
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| End bp | 890833 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640833503 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001369409 |
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| Protein GI | 153008194 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA TCGCTTCCCT TCAAGATACG ATTTTTGCTT TGTCGAGCGG GCGTCTGCCA
TCCGGCGTTG CTGTGGTACG CATTTCCGGC CCCAAAGTTC GATTCGTACT CGAAACGATA
GTCGGCTCCA TACCGACACC ACGATATGCA GCCTACAAGC TATTCCGTAG CCGAAATGGT
GATCCAATCG ACCGTGGACT GGCGCTTTTT TTCCCTGGAC CGAACAGTTT TACCGGCGAA
GATTGCGCTG AATTTCATTT GCATGGCGGC AAAGCAGTCG TTGAGAAGCT CTTGTCGGAA
ATGGGAGAGC TGCATGGTTG CCGTATAGCG GAAGCTGGAG AGTTTACGCG ACGTGCTTTT
TCTAATGGCA AGATGGACTT GACGATCGCC GAAGGCCTTG CGGATCTGAT CGCCGCGGAA
ACCGAGGGAC AGAGGCGGCT CGCATTGCAA GTCGCTTCTG GTACGCAGCG TGAGCTTTAC
ACGGAATGGC GTCAGCGTCT GTTGCGTGCA CGCGCCTTTA TAGAAGCGGA ACTCGACTTT
GCCGATGAAA GCGATGTTCC TGGTTCCGTA TCGGAGCAGG TCTGGCAGTC ACTGGCACTG
TTAAAGAGTG AGATCGAGAA CCATATAGCG AGCGGCAAGC GCGCTTCGAT GTTGCGCGAC
GGACTGCATG TCGTGATTGT TGGTGCACCG AATGCCGGTA AATCCAGCTT GCTGAACTTT
CTGGCCGGGC GCGAAGTAGC GATCATTTCG GAAGAGGCGG GAACGACCCG CGATCTTCTG
GAGGTCAAAC TCGATCTGGG CGGCATCCCG GTTTACGTGA CAGACACGGC AGGTTTGCGG
GAGACCGATA GTTCCGTCGA AAAAATCGGA ATTGAACGCG CCCGCGCGCG TATGGCCGAT
GCCGATTTGG TTCTGCTGCT TGAAGATATG AACGATCCCA TAGCTGTCGC TTCCGACGAA
ATACCAGAAG CTTTATGGAA AATCGGCACA AAAGCTGATC TGAATGCTGA ATCTGCCGAT
TGCTGGACCT ACCGCATTTC AACAAAAACT GGCGAAGGAC TGGACCAACT ACTTACGAAT
CTTCAGAATT TCGCGGAAGA GCAGATAGGC CAGATAGAGG ATGCCGTGCC CACGCGGCAG
AGACATATCA ACCTTCTGCG ATCTACTGTC ACCGAGATCG ATAGGGCGAT AAACGGTACA
AACCTTCCGC TTGAACTCCG CGCAGAGAAC ATGCGCCTTG CATCCCAGTA TCTCGGACGT
ATTACTGGTG ATGTCGATGT GGAAGAAATT TTGGACGTTA TTTTCTCTCA GTTCTGCATC
GGAAAATGA
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| Protein sequence | MSEIASLQDT IFALSSGRLP SGVAVVRISG PKVRFVLETI VGSIPTPRYA AYKLFRSRNG
DPIDRGLALF FPGPNSFTGE DCAEFHLHGG KAVVEKLLSE MGELHGCRIA EAGEFTRRAF
SNGKMDLTIA EGLADLIAAE TEGQRRLALQ VASGTQRELY TEWRQRLLRA RAFIEAELDF
ADESDVPGSV SEQVWQSLAL LKSEIENHIA SGKRASMLRD GLHVVIVGAP NAGKSSLLNF
LAGREVAIIS EEAGTTRDLL EVKLDLGGIP VYVTDTAGLR ETDSSVEKIG IERARARMAD
ADLVLLLEDM NDPIAVASDE IPEALWKIGT KADLNAESAD CWTYRISTKT GEGLDQLLTN
LQNFAEEQIG QIEDAVPTRQ RHINLLRSTV TEIDRAINGT NLPLELRAEN MRLASQYLGR
ITGDVDVEEI LDVIFSQFCI GK
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