| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0743 |
|---|
| Symbol | |
|---|
| ID | 5380269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 769605 |
|---|
| End bp | 771746 |
|---|
| Gene Length | 2142 bp |
|---|
| Protein Length | 713 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640833388 |
|---|
| Product | polynucleotide phosphorylase/polyadenylase |
|---|
| Protein accession | YP_001369294 |
|---|
| Protein GI | 153008079 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
|---|
| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.10381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAATA CCCATAAAGT AGAAATCGAA TGGGGCGGTC GTCCGCTTAC GCTCGAAACC
GGCAAGATCG CACGTCAGGC TGACGGTGCA GTTCTCGCAA CCTATGGCGA AACCGTTGTT
TTGGCGACTG TCGTTTCTGC CAAGGAGCCG AAGCCGGGCC AGGATTTCTT CCCGCTCACC
GTCAACTATC AGGAAAAGAC CTATGCCGCT GGCAAGATCC CTGGCGGCTA CTTCAAGCGT
GAAGGTCGTC CGAGCGAAAA CGAAACGCTC GTCTCGCGCC TGATCGACCG TCCGATCCGC
CCGCTCTTCG TTGAAGGTTA CAAGAACGAC ACGCAGGTTG TCCTGACTGT TGTTCAGCAC
GACCTCGAAA ACAACCCCGA CGTTCTGTCG ATGGTTGCAG CTTCCGCAGC GCTGACCATT
TCCGGCGTTC CTTTCATGGG GCCGATCGGT GGTGCGCGCG TTGGTTATAT CAACGGCGAA
TACGTCCTGA ACCCGAATAT CGACGAAATG CCGGAATCGA AGCTCGATCT GGTTGTTGCC
GGTACCGCCG ATGCTGTGCT GATGGTTGAA TCGGAAGCGC AGGAGCTTTC TGAAGAAGTC
ATGCTGGGTG CCGTTGTTTT CGGCCAGAAG GGCTTCCAGC CGGTCATCGA CGCGATCATC
AAGCTTGCTG AAGTTGCTGC CAAGGAACCG CGCGACTTCC AGCCGGAAGA TCTTTCGGAC
CTCGAAGCCA AGATGCTGGC CGTTGTCGAA AACGACCTGC GCGATGCATA CAAGATCACC
GAAAAGCAGG CTCGTTACGT TGCTGTCGAC GCTGCAAAGG CCAAGGCGAA GGCTCACTTC
TTCCCGGAAG GCGTGGAAGA GCCGGAATTC TCGGCTGAAA AATTTGCGAC CGTCTTCAAG
CATCTGCAGG CCAAGATCGT TCGCTGGAAC ATTCTCGACA CCGGCAGCCG CATTGATGGC
CGTGATCTGA AGACCGTTCG TGCAATCGTT TCGGAAGTTG GCCTTCTGCC GCGCACCCAC
GGTTCGGCGC TGTTCACCCG CGGCGAAACA CAGGCGATCG TTGTTGCCAC GCTGGGCACC
GGCGAAGACG AGCAGATGAT CGATGCCCTG ACCGGCACGT ACAAAGAATC CTTCATGCTG
CATTACAACT TCCCGCCATA TTCGGTCGGT GAAACCGGTC GTATGGGTTC GCCGGGCCGT
CGTGAAGTTG GTCATGGCAA GCTCGCATGG CGCGCTATCC ATCCGATGTT GCCTGCTGCC
GACCAGTTCC CGTACACGAT CCGTTCGGTT TCCGAGATCA CCGAATCCAA CGGTTCTTCC
TCGATGGCGA CCGTTTGCGG CACCTCGCTT GCTCTGATGG ACGCAGGCGT TCCGCTTGCA
CGTCCGGTTG CCGGTATCGC CATGGGCCTG ATCAAGGAAG GCGAACGCTT CGCCGTTCTC
TCCGACATCC TTGGCGATGA AGATCACCTC GGCGACATGG ACTTCAAGGT TGCCGGTACT
GACAACGGCA TCACCGCACT TCAGATGGAC ATCAAGATCG ACGGTATCAC CGAAGAGATC
ATGAAGGTCG CTCTGGAGCA GGCCAAGGGC GGTCGCGTTC ACATCCTCGG CGAAATGGCG
AAGGCTCTGT CCACGTCGCG TGAAGAACTC GGCGAATTCG CTCCGCGCAT CGAAGTGATG
AACATCCCGA CCGACAAGAT CCGTGATGTT ATCGGTTCTG GCGGCAAGGT TATCCGCGAA
ATCGTGGAAA AGACAGGCGC CAAGATCAAC ATCGAAGACG ACGGTACGGT CAAGATCGCT
TCGTCGAACG GTAAGGAAAT CGAAGCCGCC AAGAAGTGGA TTCACTCGAT TGTTGCCGAA
CCGGAAGTTG GCGAAATCTA CGAAGGTACG GTCGTGAAGA CTGCTGACTT CGGCGCTTTC
GTAAACTTCT TTGGTCCACG AGACGGTCTG GTTCACATTT CGCAGCTCGC TTCCGACCGC
GTTGCCAAGA CCACTGACGT GGTCAAGGAA GGCCAGAAGG TCTGGGTCAA GCTCATGGGC
TTTGACGAAC GTGGCAAGGT TCGCCTGTCG ATGAAGGTTG TCGATCAGGA AACCGGCAAG
GAAGTTGTTG CTGAAAAGAA GGCAGAAGCC GACGCTGAAT AA
|
|---|
| Protein sequence | MFNTHKVEIE WGGRPLTLET GKIARQADGA VLATYGETVV LATVVSAKEP KPGQDFFPLT
VNYQEKTYAA GKIPGGYFKR EGRPSENETL VSRLIDRPIR PLFVEGYKND TQVVLTVVQH
DLENNPDVLS MVAASAALTI SGVPFMGPIG GARVGYINGE YVLNPNIDEM PESKLDLVVA
GTADAVLMVE SEAQELSEEV MLGAVVFGQK GFQPVIDAII KLAEVAAKEP RDFQPEDLSD
LEAKMLAVVE NDLRDAYKIT EKQARYVAVD AAKAKAKAHF FPEGVEEPEF SAEKFATVFK
HLQAKIVRWN ILDTGSRIDG RDLKTVRAIV SEVGLLPRTH GSALFTRGET QAIVVATLGT
GEDEQMIDAL TGTYKESFML HYNFPPYSVG ETGRMGSPGR REVGHGKLAW RAIHPMLPAA
DQFPYTIRSV SEITESNGSS SMATVCGTSL ALMDAGVPLA RPVAGIAMGL IKEGERFAVL
SDILGDEDHL GDMDFKVAGT DNGITALQMD IKIDGITEEI MKVALEQAKG GRVHILGEMA
KALSTSREEL GEFAPRIEVM NIPTDKIRDV IGSGGKVIRE IVEKTGAKIN IEDDGTVKIA
SSNGKEIEAA KKWIHSIVAE PEVGEIYEGT VVKTADFGAF VNFFGPRDGL VHISQLASDR
VAKTTDVVKE GQKVWVKLMG FDERGKVRLS MKVVDQETGK EVVAEKKAEA DAE
|
|---|
| |