Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0727 |
Symbol | |
ID | 5379586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 754650 |
End bp | 755663 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640833372 |
Product | type II secretion system protein |
Protein accession | YP_001369278 |
Protein GI | 153008063 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.352668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGGC CCGGTGCCAG CATTGTGATG TTCATCGTGC TCGCCGTTGT CGCCTGCGCG GCTTTGTTCT ATGCGCTCTT TTATGAAAAG CTCGGCAAGA AGGACCACGC GGCACGGCGC TTTGAAACCG TGCGCAACAG CGGTTCAGAA CGGGCGATAA CGCGTAGCGA ACGCGACAGA AACGCCGACA TCCAAAAGCG CCGCAAGCAG TTGCAGGATA ATATCAAGGA TCTGGAAGCG CGGCAGAAGC AGCGCGAGAA GAACCAGAAA TATCCACCCC TGCGCATTCT TCTGGCACAG GCGGGGCTGA GCCTCACGTT GCAGAAATTC TACATCTATT CCGGCGTGGC AGCGTTTCTC GCAACATTCA TTGCACTGAT TTTCGGCGCG CCGCTGCTTT TCCTGCCAGG TATCGCAATT GCCGGTTTTT TCGGTTTGCC GCGCTGGTTC GTGCTGCAGA AGCGCAAACG TCGGCTGAAG AAATTCCTTG AAGAATTTCC CAACGCGCTT GATGTCATTG TGCGCGCAAC CCGGGCGGGA CTGCCGCTTA ATGACGGTCT GAGACTTATT GCGAGTGAGG CAGTTGAACC GGTCAAGAGC GAGTTCAAGA AGGTGGTCGA GGCACAGCAG ATCGGCCTTT CTATCCCTGA AGCGGTCGGC AAGATGCCCG ATTCCATGCC CTGCCCGGAA ACCAACTTCT TCGCCATCGT CATCCAGATA CAGGCGCAGG CAGGCGGTAA TCTTTCCGAA GCGCTCAATA ATCTTTCAAA GGTTCTGCGC GACCGGAAGA AGATGAAGGC CAAGGTCGAT GCGCTTTCCA TGGAAGCCAA GGCTTCGGCT GCGATCATCG GCGCGCTGCC TTTCATCGTT ATGGTTCTCG TCTATCTGAC GAGCCCGCAA TATATGACGC TGCTTTTCAC GTCATCCACC GGCCATATGC TCCTGGGCAT TGCAGCCGTT TTGATGCTGA CCGGCATCTT CATCATGAAA AATATGATCA ATTTCGATAT GTGA
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Protein sequence | MTGPGASIVM FIVLAVVACA ALFYALFYEK LGKKDHAARR FETVRNSGSE RAITRSERDR NADIQKRRKQ LQDNIKDLEA RQKQREKNQK YPPLRILLAQ AGLSLTLQKF YIYSGVAAFL ATFIALIFGA PLLFLPGIAI AGFFGLPRWF VLQKRKRRLK KFLEEFPNAL DVIVRATRAG LPLNDGLRLI ASEAVEPVKS EFKKVVEAQQ IGLSIPEAVG KMPDSMPCPE TNFFAIVIQI QAQAGGNLSE ALNNLSKVLR DRKKMKAKVD ALSMEAKASA AIIGALPFIV MVLVYLTSPQ YMTLLFTSST GHMLLGIAAV LMLTGIFIMK NMINFDM
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