Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0589 |
Symbol | ispH |
ID | 5379869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 617889 |
End bp | 618941 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640833242 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_001369149 |
Protein GI | 153007934 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.170787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGATC AGCGACCATC ACTGGAAATT CGTCTTTGCG GGCCGCGCGG CTTTTGTGCC GGAGTGGACC GGGCGATCCA GATTGTTGTG CTGGCGCTGA AGAAATATGG CGCGCCGGTT TATGTTCGTC ATGAGATCGT GCACAACCGA TATGTAGTTG AGGGTCTGCA GTCGCGTGGC GCGATCTTTG TCGAGGAACT GCACGAAATA CCTGCGGAGC ACCGCGATCA GCCGGTAGTA TTCTCCGCCC ACGGTGTGCC GAAATCGGTG CCTGCCGATG CGGAAGCCAA GAACCTGTTC TATCTCGATG CAACCTGTCC GCTGGTTTCC AAGGTTCATA AGCAGGCCAT GCGTCATCAG CGCCTCGGTC GCCATGTCAT TCTGATAGGC CATTCCGGTC ATCCGGAAGT GATTGGCACG ATGGGGCAAT TGCCGGACGG TGCGGTGACA TTGATCGAAA CGGTTGAGGA TGCGCGCAGC TGCCATTTCG ATGATGAGAA CAATCTCGGC TTCGTGACGC AGACGACGCT TTCGGTGGAC GACACAGCAG GCATTATCGA AGAATTACAA GCACGCTTTC CAAACCTTTC CGCGCCTGCT GCGGAATCGA TCTGCTATGC CACGACCAAC CGGCAGGATG CAGTGCGTTC CGCCGCTCCC GGATGCGATC TTTTTCTGAT CGTCGGTGCG CCCAATTCCT CCAACTCCAA GCGACTGGTT GAAGTGGCGG AGAAGGCGGG CGCACGGATG TCGATGCTGG TTCAACGCGC GGCTGATATC GAGTGGGACC GCATCGGTGA TATATCGGTT GTGGGGTTAT CGGCAGGTGC TTCCGCGCCT GAAATCATCG TCGATGAAAT CATCGATGCC TTCAAGGCAC GCTTCAACGT GAAGATTGAA CTGGCCGAAA CTACGGTCGA AACCGAGAAT TTCCTTGTGA ATCGCGAGAT TCGCGATGTG GAACTGACGG TGCAGGATAT GGCATTCGTC AACGGGGAAC ACCGGGTGGT CGGTATTCCG AAATTGATGC CCAAGATCAT ACAAGGGAAA TAA
|
Protein sequence | MTDQRPSLEI RLCGPRGFCA GVDRAIQIVV LALKKYGAPV YVRHEIVHNR YVVEGLQSRG AIFVEELHEI PAEHRDQPVV FSAHGVPKSV PADAEAKNLF YLDATCPLVS KVHKQAMRHQ RLGRHVILIG HSGHPEVIGT MGQLPDGAVT LIETVEDARS CHFDDENNLG FVTQTTLSVD DTAGIIEELQ ARFPNLSAPA AESICYATTN RQDAVRSAAP GCDLFLIVGA PNSSNSKRLV EVAEKAGARM SMLVQRAADI EWDRIGDISV VGLSAGASAP EIIVDEIIDA FKARFNVKIE LAETTVETEN FLVNREIRDV ELTVQDMAFV NGEHRVVGIP KLMPKIIQGK
|
| |