| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0520 |
|---|
| Symbol | |
|---|
| ID | 5380677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 546796 |
|---|
| End bp | 548661 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640833173 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001369080 |
|---|
| Protein GI | 153007865 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCAAG GATCGAAATA CCGCCCGCTT TATGGTTTGC TGCTCTCGCT TCTGGCGGGA
ATCGCGATCC CGACAAGCGG CGCTTTGGCC AAGGCGACAA ATGATCCTGC ACCGCCTCCT
GTCCGCGCCG GTTCGTTTGC CGGGGCCTAT CTTGCCGGAC GTACCGCCGA ATCCGACAAT
AATCTCGCGA CCGCCGTCGA TTTCTATCGT CAGGCTATGG CCTTCGATCC GGGCAATGCG
CAGATCAAGC AGGATCTGCT ACTGGTTTTG CTGACGGAGG GCCGTTTCAA GGATGCGCTG
CCTCTGGCGG AAGAACTGAA GAACGTCCCG GACATCGAGC GTTTTTCGCG CGTGGCGCTG
GCCATCGACG CCATTGACCG CAAGCAATAT CGCAAGGTCG GGCAGCTTCT GATGCTGTCG
CTGCAATCCG ATATGGATCG CCTTGCGACC GGCTTCATGA GCGCGTGGGT GAAGGTCGGG
CAGGGCAACC CCAAACAGGC GCTCGCCGAT ATCCAGAAAA TGCAGGGACC GGAATGGTAT
GGTCTGTTCC GCACCTATAA TTCCGCACTG ATAGCCGATC TCGCCGGCCA GAAGCAGGAA
GCGCGTGATT TCTACCAGCA GGCCATCGAC GATCGGCCCG GCGGGAGCGC TGCCCCTGAC
ACTTACGAAC GCATCGTGAT GGCCTATGCC TCCTTCAAGC TTCGTCAGGG TGACAAGGAA
GGTGCTATCA AGACGTTGAA TGATGCAGCC GAGCTTTTGA ACGGTCGCAT GACGATCACC
GAAATGCGTG AAAAGATCGA GGCTGGCGAG AAATATGGCC GCCTGATCAA AACCGCTCAG
GAAGGGACTG CCGAAGCGCT CTATACTCTT GGCACTGCGA TCAACCGCAG CGGCGCGGAA
GCCTTTGCAA AGCTTTATCT GCAGATGTCG TTGCCGCTGC GTCCGGACAA TGACGCAACG
CTTTATCAGC TGGGCGATAT TTCCGCCAAG TTGCGCCAGC CGGAAAAGGC CATCGACTAC
TATGGTCGCG TGCCGGAGAA GTCGCCTTAT CGTCGTGATG CGGAAATGCA GCGTGCACTC
AATCTGGCGG AAAACGACCA GTCTGCCGAC GCCGTCAAGC AGCTGAGAGT TCTGCTCGAC
CGTGACAAGA CCGACATGCG CACTTATCTG GCGCTCGGTG GTGTCTATGC ACAGGACAAG
AATTTCGCCG ATGCGGCGAA GATTTATGAT GCTGCGGTGG AACAGATCAA GACGCCGGAA
CGCAAGGACT GGCCGGTCTT CTACCAGCGC GGCATCGCCT ATGAACGCCT GAAGCAATGG
GACAAGGCGG AGCCCAATTT CCGCAAGGCG CTGGAGCTTT ATCCCGATCA GCCACAGGTG
CTGAACTATC TTGGTTATTC CTGGGTCGAC CGGGGTGAAA ATCTCGATGA AGCGCTGGGC
ATGATCAAGA AGGCGGTCGA GCTGCGTCCG CAGGACGGCT ATATCGTCGA CTCGCTGGGC
TGGGCCTATT ACATGCTGGG CCGGTATGAC GAGGCGGTGG TCGAACTGGA AAAGGCGGTC
AAGCTTCGTC CGGAAGACCC GACGATCAAC GACCATATGG GCGATGCCTA CTGGCGTGTC
GGGCGTCTTC TGGAAGCGAC ATTCCAGTGG AACCATGCCA TTGCAGGCAA GCCCGAGCCG
GAAGATCTGG TGAAGATCGA GGCGAAGCTG AAGAAGGGTT TGCCGGATAT CCCGGGGCAA
TCTTCTGCCG ATGCTGCAAA GCCCGACGAG AAAAAGCCTG TCGAGCAGAA GCCGGAAGCT
CCTGAACAAT CGCCTGCGCC TGCCGCACCG TCCGACAAGG CTCCAGAAAA ACCGGCTACT
GACTAA
|
|---|
| Protein sequence | MRQGSKYRPL YGLLLSLLAG IAIPTSGALA KATNDPAPPP VRAGSFAGAY LAGRTAESDN
NLATAVDFYR QAMAFDPGNA QIKQDLLLVL LTEGRFKDAL PLAEELKNVP DIERFSRVAL
AIDAIDRKQY RKVGQLLMLS LQSDMDRLAT GFMSAWVKVG QGNPKQALAD IQKMQGPEWY
GLFRTYNSAL IADLAGQKQE ARDFYQQAID DRPGGSAAPD TYERIVMAYA SFKLRQGDKE
GAIKTLNDAA ELLNGRMTIT EMREKIEAGE KYGRLIKTAQ EGTAEALYTL GTAINRSGAE
AFAKLYLQMS LPLRPDNDAT LYQLGDISAK LRQPEKAIDY YGRVPEKSPY RRDAEMQRAL
NLAENDQSAD AVKQLRVLLD RDKTDMRTYL ALGGVYAQDK NFADAAKIYD AAVEQIKTPE
RKDWPVFYQR GIAYERLKQW DKAEPNFRKA LELYPDQPQV LNYLGYSWVD RGENLDEALG
MIKKAVELRP QDGYIVDSLG WAYYMLGRYD EAVVELEKAV KLRPEDPTIN DHMGDAYWRV
GRLLEATFQW NHAIAGKPEP EDLVKIEAKL KKGLPDIPGQ SSADAAKPDE KKPVEQKPEA
PEQSPAPAAP SDKAPEKPAT D
|
|---|
| |