Gene Oant_0112 details

Gene Information

• Locus tag: Oant_0112
• ID: 5379000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: -
• Start bp: 116127
• End bp: 117962
• Gene Length: 1836 bp
• Protein Length: 611 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640832761
• Product: dihydroxy-acid dehydratase
• Protein accession: YP_001368672
• Protein GI: 153007457
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTCCTT ATCGTTCGCG TACAACCACC CACGGTCGCA ACATGGCCGG CGCGCGCGGC 
CTATGGCGCG CCACCGGCAT GAAGGATGAG GATTTCGGCA AGCCGATTAT TGCCGTGGTG 
AACTCGTTCA CCCAGTTCGT GCCCGGCCAC GTGCACCTGA AGGACCTCGG CCAGCTCGTT 
GCGCGCGAAA TTGAAAGCGC TGGCGGCGTG GCAAAAGAAT TCAACACCAT TGCGGTCGAT 
GACGGCATCG CCATGGGTCA CGACGGCATG CTCTATTCGC TGCCGTCGCG TGAACTCATC 
GCCGACTCGG TCGAATATAT GGTCAATGCC CATTGCGCCG ATGCGATGGT CTGCATTTCC 
AACTGCGACA AGATCACTCC CGGTATGCTG ATGGCCGCTC TGCGCCTCAA TATCCCGGTC 
GTGTTCGTTT CCGGCGGTCC GATGGAAGCA GGCAAGGTCG TCTGGGATGA TCAGGTCAAG 
AAGCTCGACC TCGTCGATGC GATGGTTGCA GCCGCCGACG ACAGCTACAC CGACGATCAG 
GTCAAGGCGA TTGAGCGTTC AGCATGCCCG ACCTGCGGTT CGTGCTCGGG CATGTTCACC 
GCAAACTCGA TGAACTGCCT CACCGAAGCG CTCGGCCTGT CGCTGCCGGG CAATGGCTCG 
ACGCTCGCAA CCCATGCCGA CCGCAAGCGC CTCTTCGTGG AAGCCGGTCA TCTGGTTGTC 
GATCTCGCCC GCCGTTATTA CGAGCAGGAC GACGAAAGCG TGCTGCCACG CTCGATTGCG 
AGCTTCCCGG CTTTTGAAAA CGCCATGACG CTCGACATTG CCATGGGCGG TTCGACCAAT 
ACGGTTCTGC ATCTGCTTGC AGCTGCACAG GAAGCCGAAA TCGATTTCAC CATGGCCGAT 
ATCGACCGCC TGTCGCGCCG CGTGCCGGTG CTCTGCAAGG TCGCGCCTGC CAACAATACC 
GTTCACATGG AAGATGTGCA CCGCGCAGGC GGCATCATGG GCATTCTCGG TCAGCTCGAC 
AAGGCAGGGC TGATCAATAC CGATCTGCCG ACCGTGCACA GCGAAACCGT TGCCAAGGCG 
CTCGATCATT GGGACGTGAC CCGCACCAAC AGCGACATGG TGCACAAGTT CTATTCAGCT 
GCACCCGGTG GCGTGCCGAC GCAGGTTGCC TTCTCTCAGG AACGCCGCTT CGACAGCGTC 
GATACCGACC GTGAAAAGGG CGTCATCCGC TCCAAGGAAC ACGCCTTCAG TCAAGATGGC 
GGTCTGGCCG TGCTTTACGG CAATCTGGCC GAAGACGGCT GCATCGTGAA GACAGCAGGC 
GTGGACGATT CCATCCTGAA GTTCTCCGGC CCTGCCCGCA TCTTCGAAAG TCAGGATACC 
GCAGTACTCG GCATTCTGAA CGGCAAGATC AAGGCTGGCG ACATTGTACT GATCCGCTAT 
GAAGGCCCGC GCGGCGGCCC CGGCATGCAG GAAATGCTCT ACCCGACCAG CTATCTGAAG 
TCGAAGGGTC TGGGTAAGGC TTGCGCGCTG ATCACCGACG GACGTTTCTC GGGCGGCTCT 
TCAGGCCTCT CGATTGGTCA CGTTTCGCCG GAAGCAGCCG AAGGCGGCAC CATTGGTCTG 
GTGCGCGAAG GCGATATCAT TGATATCGAC ATTCCAAACC GCAAGATCCA TCTGGCTGTT 
GATGATGCAA CGCTGGCAGA ACGCCGCGCC GAGCAGGAAG AAACGGGCTG GAAGCCAGCG 
GAAACACGCA AGCGCAAGAT TTCCACTGCC TTGAAGGCTT ATGCTTCGAT GGCAACCAGT 
GCCGCCAAGG GCGCGGTGCG GAAACTGCCG GATTGA 

 

Protein sequence

MPPYRSRTTT HGRNMAGARG LWRATGMKDE DFGKPIIAVV NSFTQFVPGH VHLKDLGQLV 
AREIESAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSRELI ADSVEYMVNA HCADAMVCIS 
NCDKITPGML MAALRLNIPV VFVSGGPMEA GKVVWDDQVK KLDLVDAMVA AADDSYTDDQ 
VKAIERSACP TCGSCSGMFT ANSMNCLTEA LGLSLPGNGS TLATHADRKR LFVEAGHLVV 
DLARRYYEQD DESVLPRSIA SFPAFENAMT LDIAMGGSTN TVLHLLAAAQ EAEIDFTMAD 
IDRLSRRVPV LCKVAPANNT VHMEDVHRAG GIMGILGQLD KAGLINTDLP TVHSETVAKA 
LDHWDVTRTN SDMVHKFYSA APGGVPTQVA FSQERRFDSV DTDREKGVIR SKEHAFSQDG 
GLAVLYGNLA EDGCIVKTAG VDDSILKFSG PARIFESQDT AVLGILNGKI KAGDIVLIRY 
EGPRGGPGMQ EMLYPTSYLK SKGLGKACAL ITDGRFSGGS SGLSIGHVSP EAAEGGTIGL 
VREGDIIDID IPNRKIHLAV DDATLAERRA EQEETGWKPA ETRKRKISTA LKAYASMATS 
AAKGAVRKLP D