Gene Oant_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_0060 
Symbol 
ID5378817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp68846 
End bp70417 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content59% 
IMG OID640832709 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001368620 
Protein GI153007405 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGCTC CATACAATCT CAAGGACGAC AAGGTCGTCG TTATCATCGG CTCGGGCGCT 
GGCGGCGGCA CGCTCGGCAA CGAACTGGCC CAGAAAGGCA TCGACGTCGT CATTCTCGAA
GCCGGAAAAC GCCACGAGTT CGAAGATTTT ATCAATGATG AATGGGATAG TTTTGCCCAG
CTCGCCTGGC TCGACAAGCG CACGACATCG GGCAGCTGGC GCGTGGCGAA CGATTTCCCG
AACCTGCCCG CATGGATCGT GAAGGCTGTC GGCGGCACCA CCACCCACTG GGCTGGTGCA
TCCTTGCGTT TTCAGGATTA CGAGTTCGAG ACCCTGACCC ATTACGGCAA GATCGAAGGG
GCAAATCTGC TCGACTGGCC GATCACGCTG GCCGATCTGG AGCCTTACTA CGCCAAGGCC
GAGGACAAGA TGGGGGTCAC CCGCACCAAC GGCATTGAGG GTCTGCCCGG CAACAATAAT
TTCAAGGTTA TGAAAGCCGG TGCCGACAAG CTCGGCTACA AGGAATGCCA TACGGGTCGC
ATGGCTATCA ATTCCGCCCC GCGCGACGAC CGCATGGCCT GCCAGCAGAC CGGCTTCTGC
TTTCAGGGCT GCAAATGGGG CGCAAAATGG TCGACGCTCT ATACGGAAAT TCCCAAGGGC
GAGGAAACCG GCAGGCTGGA AGTTCGCCCG GAATGCACGG CGCTCAAGAT CGAGCACAAT
GCGGCAGGCA AGGTGACGGG CGTGCTCTAT GCCGACAAGG ATGGCAAGCA GCACTTGCAG
AAGGCGCGCG TCGTCTGCGT GGCAGGCAAT TCGATTGAAA GCCCGCGCCT TCTGCTCAAT
TCGGCTTCGT CGAAATTCCC GGACGGCCTC GCCAATTCGT CAGGACAGGT CGGGCGCAAC
TATATGCGCC ACACGACCGG TTCGGTCTAT GCCTCGTTTG AAAAGCCGGT TCACATGTAT
CGCGGCACCA CCATGGCAGG CATCATCCGC GATGAGGCTG CGCATAATCC GAAACGAGGC
TTCGTCGGCG GCTATGAGAT GGAAACCGTT TCGCTTGGCC TGCCTTTCAT GGCTGCCTTC
CTCAATCCGG GCGGTTGGGG GCGCAGCTTC ACCTCGGCAC TCGACGATTA TGTCAACATG
GCCGGTCTCT GGATCGTCGG CGAAGACATG CCGCAGGAGA AAAACCGCAT CACGCTGAGC
AAGGACGTGA AGGACGAACA CGGCTTGCCG GTTCCCGACG TCTATTACGA CGATCACCCG
AACGATATCG CCATGCGCGA TCATGCCTAT GCGCAGGGCA AGGCGCTTTA TGAGGCCGTT
GGTGCCGTCC GTACCTTCCC GACCCCACCC TATCCGTCAA CGCATAATCT GGGCACCAAC
CGGATGAGCG AAAAGCCGCA GGATGGCGTC GTGAACAAGC ACGGACAGAC GCATGACATC
AAGAATCTGT TCGTTTCCGA TGGCAGCCAG TTCACAACCG GCGGCGCGGA AAACCCGACC
CTGACCATCG TAGCTCTCGC TATCCGTCAG GCTGATTATA TCGCGGAACA GATGAAGAAG
CGGGCGATCT GA
 
Protein sequence
MAAPYNLKDD KVVVIIGSGA GGGTLGNELA QKGIDVVILE AGKRHEFEDF INDEWDSFAQ 
LAWLDKRTTS GSWRVANDFP NLPAWIVKAV GGTTTHWAGA SLRFQDYEFE TLTHYGKIEG
ANLLDWPITL ADLEPYYAKA EDKMGVTRTN GIEGLPGNNN FKVMKAGADK LGYKECHTGR
MAINSAPRDD RMACQQTGFC FQGCKWGAKW STLYTEIPKG EETGRLEVRP ECTALKIEHN
AAGKVTGVLY ADKDGKQHLQ KARVVCVAGN SIESPRLLLN SASSKFPDGL ANSSGQVGRN
YMRHTTGSVY ASFEKPVHMY RGTTMAGIIR DEAAHNPKRG FVGGYEMETV SLGLPFMAAF
LNPGGWGRSF TSALDDYVNM AGLWIVGEDM PQEKNRITLS KDVKDEHGLP VPDVYYDDHP
NDIAMRDHAY AQGKALYEAV GAVRTFPTPP YPSTHNLGTN RMSEKPQDGV VNKHGQTHDI
KNLFVSDGSQ FTTGGAENPT LTIVALAIRQ ADYIAEQMKK RAI