| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0013 |
|---|
| Symbol | |
|---|
| ID | 5379599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 12301 |
|---|
| End bp | 13398 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640832660 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001368573 |
|---|
| Protein GI | 153007358 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0654461 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCAT ATATTCTCCG CCGTCTGCTT CTGATGATTC CGACGATACT CGGCATCATG
GCTATTTCCT TCGCTGTGGT TCAGTTCGCC CCCGGCGGTC CGGTCGAGCG CGTGATTGCG
CAGCTTTCAG GCCAGGGCGG CGACGCTCTC GACCGCCTTT CCGGCGGTGG TGGCGATTTC
GGGCAAAGTG CCGTCGACAG CGGCTCGGTC AATTCCAAAT ATCGCGGCGC GCAGGGGCTC
GACCCGCAAT TCATTGCCGA TTTGGAAAAG CAGTTCGGTT TCGACAAGCC GCCGCTGGAA
CGGTTCGGCC AGATGCTGTG GAACTATCTG CGCTTCGATT TCGGCCGCAG CTATTTTCGC
GATATCAGCG TGATCGACCT CATCAAGGAA AAGATGCCGG TTTCAATCTC GCTCGGCCTG
TGGCTGACTT TTCTGTCCTA CATGATCTCG ATTCCACTCG GCATTCGCAA GGCAATCAAG
GACGGTTCGC GCTTCGACAC CTGGACCAGC GCCGTCATCA TCGTCGGCTA CGCCATTCCA
AGCTTCCTGT TTGCAATCCT GCTGATCGTA CTGTTTGCGG GCGGCTCGTT CTTCGACTGG
TTCCCGTTGC GCGGCCTCAC CTCGCCCGAT TTCGCGCAGA TGTCGTTCTG GGGCAAGATC
GGCGACTATC TGTGGCATAT GGTGCTGCCG GTGACTGCAC TCGTGCTTTC CGCCTTCGCC
ACCACGACAT TGCTGACCAA GAATTCGTTT CTGGAAGAAA TCCGCAAGCA ATATGTAACC
ACGGCGCGCG CCAAGGGACT GACCGAGAAT CAGGTTCTCT ATCGTCATGT CTTCCGCAAT
GCGATGCTGA TCGTGATCGC CGGTTTTCCG GGCGCTTTCA TCTCGGCATT CTTCACCGGT
TCGCTTCTGA TCGAAACCAT CTTCTCGCTC GACGGACTTG GCCTGCTGGG CTACCAGTCG
GTCATCAACC GCGATTATCC CGTGGTCTTC GCCAATCTCT TCATCTTCTC GCTGATCGGC
CTTCTGGTCG GTCTCCTGTC CGATCTCACC TATACGTGGA TCGATCCGCG CATCGACTTT
GACCGGAGGG ACGTGTGA
|
|---|
| Protein sequence | MGAYILRRLL LMIPTILGIM AISFAVVQFA PGGPVERVIA QLSGQGGDAL DRLSGGGGDF
GQSAVDSGSV NSKYRGAQGL DPQFIADLEK QFGFDKPPLE RFGQMLWNYL RFDFGRSYFR
DISVIDLIKE KMPVSISLGL WLTFLSYMIS IPLGIRKAIK DGSRFDTWTS AVIIVGYAIP
SFLFAILLIV LFAGGSFFDW FPLRGLTSPD FAQMSFWGKI GDYLWHMVLP VTALVLSAFA
TTTLLTKNSF LEEIRKQYVT TARAKGLTEN QVLYRHVFRN AMLIVIAGFP GAFISAFFTG
SLLIETIFSL DGLGLLGYQS VINRDYPVVF ANLFIFSLIG LLVGLLSDLT YTWIDPRIDF
DRRDV
|
|---|
| |