| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4379 |
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| Symbol | |
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| ID | 5373424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5227262 |
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| End bp | 5228887 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640832645 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001368556 |
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| Protein GI | 153002875 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000322788 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCTC AACGCAATAT ATTGCTCATA GGACTACTGT TTGTCAGCTT TTTGCTGTGG
CAACAGTGGC AAGCAGACAA AGCTCCTAAA CCAGTTGCAA CCGAATCGTC CTTAGTGGCG
AACGCGGCAA ACTCACACAG TGCCGATGTT CCAGAAGCTG ATACAGGTGT TCCTGCAGCA
GTGACAGCAA CCAGCAAACT GATTACCGTG AAAACCGACC AGTTGGATGT TCAAATTAAT
CCAATCGGTG GCGACATTGT TTTTGCTGCG TTAGTTTCGC ACAAAATGGA ACAGGATAAA
GATCAACCCT TCGTGTTGCT TGAGCAAACG AAAGATTTCA CTTATATAGC CCAGAGCGGT
CTTATAGGTC GCGATGGTAT CGACAGTAGC GCCAAAGGCC GTGCCGCATT TAGCACTGCA
GCGACTGAAT ATACCTTAGC CGAAGGTCAA GACACTTTAG AAGTGCCGTT AACTTATGTA
GCCGACAATG GCGTGACATA CACTAAAGTG TTTGTATTCC ATCGCGGTAA GTTCAACGTC
GATGTTGACT ATAAAATCAA CAACACTTCA GCGGCTCCGC TGCAAGTTCA GATGTACGGT
CAAATTAAAC AAACGATTAA ACCGTCTGAA AGCAGCATGG TTATGCCTAC CTACCGTGGT
GGTGCATTCT CTACGCAAGA TGTGCGTTAT GAGAAATACA AATTTGATGA CATGGCGAAA
AGCAACCTGA ACCAAGCGAC GTTGGGCGGT TGGGCTGCCA TGCTACAACA TTACTTTGTT
TCAGCTTGGA TCCCACCGGC TACCGACAGC AACACAATTT TCTCTAGTGT CAGTGCGGGC
GGTTTAGCCA ATATTGGTTT CCGCGGCGCG GTATATGATA TTGCACCAGG TGCGACTCAA
GAAATTAGCT CACAGTTCTA CGTTGGTCCT AAGGATCAAA AAGCACTGTC AGCCATCTCT
GATACCTTAA ACCTAGTGGT CGATTACGGC TTCCTATGGT GGTTAGCTGT ACCTATTCAC
TGGCTATTGA TGTTCTATCA GTCATTCGTC GGTAACTGGG GTATGGCTAT TATTCTGATC
ACCTTAACCG TTCGTGGTTT ACTGTTCCCG CTGACAAAAG CACAGTACAC CTCAATGGCG
AAGATGCGTA ACCTGCAACC TAAACTGACT GACTTGAAAG AACGCTTTGG TGATGACCGT
CAAAAGATGG GTCAGGCCAT GATGGAACTG TATAAGAAAG AAAAAGTTAA CCCTATGGGT
GGCTGTTTAC CTATTATTTT ACAGATGCCA ATCTTCATTG CCTTGTACTG GGTATTGTTA
GAAAGCTTCG AATTACGTCA CGCACCCTTT ATGTTGTGGA TCCACGATTT ATCGGTACAA
GATCCTTACT ACATATTGCC GTTGCTGATG GGCGTATCTA TGTTTGTGAT GCAGAAGATG
CAACCTATTG CACCGACTAT GGACCCAATG CAAGTGAAAA TGATGCAGTG GATGCCAGTG
ATCTTTACCG TATTCTTCCT CTGGTTCCCA GCGGGTCTAG TACTGTACTG GTTAGTGGGT
AACATAGTTG CTATCACGCA ACAGAAGATT ATTTATGCAG GTCTGGCGAA AAAAGGCTTA
AAATAA
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| Protein sequence | MESQRNILLI GLLFVSFLLW QQWQADKAPK PVATESSLVA NAANSHSADV PEADTGVPAA
VTATSKLITV KTDQLDVQIN PIGGDIVFAA LVSHKMEQDK DQPFVLLEQT KDFTYIAQSG
LIGRDGIDSS AKGRAAFSTA ATEYTLAEGQ DTLEVPLTYV ADNGVTYTKV FVFHRGKFNV
DVDYKINNTS AAPLQVQMYG QIKQTIKPSE SSMVMPTYRG GAFSTQDVRY EKYKFDDMAK
SNLNQATLGG WAAMLQHYFV SAWIPPATDS NTIFSSVSAG GLANIGFRGA VYDIAPGATQ
EISSQFYVGP KDQKALSAIS DTLNLVVDYG FLWWLAVPIH WLLMFYQSFV GNWGMAIILI
TLTVRGLLFP LTKAQYTSMA KMRNLQPKLT DLKERFGDDR QKMGQAMMEL YKKEKVNPMG
GCLPIILQMP IFIALYWVLL ESFELRHAPF MLWIHDLSVQ DPYYILPLLM GVSMFVMQKM
QPIAPTMDPM QVKMMQWMPV IFTVFFLWFP AGLVLYWLVG NIVAITQQKI IYAGLAKKGL
K
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