Gene Shew185_4376 details

Gene Information

• Locus tag: Shew185_4376
• ID: 5370262
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 5222737
• End bp: 5224626
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640832642
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_001368553
• Protein GI: 153002872
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0177883
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTTTC ATGAACGGTT TGATGTTATT GTTGTTGGTG GTGGTCATGC CGGAACTGAA 
GCCGCGTTGG CAGCAGCAAG AATGGGATCA AAAACATTAT TACTAACGCA CAATATCGAT 
ACGTTAGGAC AAATGTCATG TAATCCAGCG ATCGGTGGCA TAGGCAAAGG CCACCTAGTG 
AAAGAAATTG ACGCCTTAGG TGGTGCAATG GCGATCGCAA CCGATTATGC AGGGATCCAA 
TTTAGAACCT TGAATTCAAG CAAAGGCCCA GCAGTACGAG CGACACGTGC ACAAGCTGAC 
CGTGCGCTGT ATCGTCAAAA AATCCAAAAC ATATTACAAA ACCAACCTAA CTTACGTATT 
TTCCAACAAG CCGTTGATGA CTTAATTGTT GAAAATCATC AAGTCGTTGG CGTAGTGACT 
CAAATGGGAT TAGCCTTTGA ATCTCCAGCC GTTGTGTTAA CAACAGGCAC ATTCTTAAGC 
GGCAAAATCC ACATAGGGTT AGAAAACTAC AGCGGTGGTC GTGCAGGCGA TCCACCAGCC 
ATTGCCTTAG CCAATCGTTT ACGTGAGTTA CCGATCCGTG TGGGCCGTTT AAAAACTGGT 
ACCCCGCCAC GTATCGATGC AAACACGATC GATTTTTCTC AAATGACTGA ACAAAAAGGT 
GATTCTCCGT TACCTGTGAT GTCGTTTATG GGCGATGTCA GTCATCATCC AAAGCAGATT 
TCTTGCTGGA TCACTCATAC CAATGAAAAA ACCCATGAAA TTATTCGTGG TGGTTTAGAC 
AGAAGCCCAA TGTATTCAGG CGTAATCGAG GGTATTGGCC CGCGTTATTG CCCATCGATT 
GAAGACAAGA TCCATCGCTT TGCAGATAAA TCTTCGCATC AGATCTTTAT CGAACCTGAA 
GGGTTAAATA CCAATGAGAT CTACCCTAAC GGGATCTCGA CCAGCTTACC TTTCGATGTA 
CAGCTGAATT TAGTACGTTC GATCAAGGGC ATGGAAAACG CAGAAATTAT GCGTCCAGGT 
TATGCGATCG AATATGATTA TTTCGATCCA AGGGATCTGA AAAACTCATT AGAAACCAAA 
GCGATCAACG GGTTATTCTT CGCTGGCCAA ATAAACGGCA CAACCGGTTA TGAAGAAGCC 
GGTGCTCAAG GTTTATTAGC GGGCATGAAT GCGTCACTGC AAGTGCAAGG CAAAGAAGCT 
TGGTGTCCAC GTCGCGATGA AGCGTATCTT GGGGTGCTGG TTGACGATCT GTCGACTCTG 
GGTACCAAAG AACCGTACCG CATGTTTACT AGCCGTGCCG AATACCGTTT GTTACTCCGT 
GAAGATAACG CCGACATTCG CTTAACGGCC AAAGGTCGCG AACTCGGTTT AGTCGACGAC 
GCTCGCTGGG CAGAATTTAG TGAGAAGCTA GAATCCATTG AACTTGAACT GCAAAGGCTA 
CGTGGCCAAT GGGTGCATCC AAATTCGCCT TTGATCCATG CGTTAAACCC GCACTTGAAT 
ACGCCGATCT CGCGCGAAGC GTCATTTGAA GAGTTACTGC GTCGTCCAGA AATGGATTAC 
AGCAAGTTAA TGCAGATTGA AGGTTTTGGT CCTGGGCTTG AAGATCCACA AGCAGCTGAA 
CAAGTTCAGA TCCAAGTGAA GTACTCTGGT TATATTCAAC GCCAGCAGGA AGAGATCAAC 
AAAGCCGTGC GTAATGAGAA CACAGGTTTA CCTTTGACGC TCGATTACAA AGAAGTACCG 
GGCTTGTCGA ACGAAGTGAT TGCTAAGTTA AATAACCACA AACCAGAAAC CATAGGCCAA 
GCGTCACGGA TCTCTGGTAT TACCCCTGCG GCTATTTCAA TTTTGTTGGT TCACCTCAAA 
AAGCGTGGCT TATTACGTAA GAGTGCGTAA 

 

Protein sequence

MHFHERFDVI VVGGGHAGTE AALAAARMGS KTLLLTHNID TLGQMSCNPA IGGIGKGHLV 
KEIDALGGAM AIATDYAGIQ FRTLNSSKGP AVRATRAQAD RALYRQKIQN ILQNQPNLRI 
FQQAVDDLIV ENHQVVGVVT QMGLAFESPA VVLTTGTFLS GKIHIGLENY SGGRAGDPPA 
IALANRLREL PIRVGRLKTG TPPRIDANTI DFSQMTEQKG DSPLPVMSFM GDVSHHPKQI 
SCWITHTNEK THEIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFADK SSHQIFIEPE 
GLNTNEIYPN GISTSLPFDV QLNLVRSIKG MENAEIMRPG YAIEYDYFDP RDLKNSLETK 
AINGLFFAGQ INGTTGYEEA GAQGLLAGMN ASLQVQGKEA WCPRRDEAYL GVLVDDLSTL 
GTKEPYRMFT SRAEYRLLLR EDNADIRLTA KGRELGLVDD ARWAEFSEKL ESIELELQRL 
RGQWVHPNSP LIHALNPHLN TPISREASFE ELLRRPEMDY SKLMQIEGFG PGLEDPQAAE 
QVQIQVKYSG YIQRQQEEIN KAVRNENTGL PLTLDYKEVP GLSNEVIAKL NNHKPETIGQ 
ASRISGITPA AISILLVHLK KRGLLRKSA