| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4355 |
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| Symbol | |
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| ID | 5369831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5194357 |
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| End bp | 5196807 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640832618 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001368532 |
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| Protein GI | 153002851 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCGTA AGCTTTCGCT CGCGGTACTG CTCCCTCTGT GTATGCTGGC ACTATATTTA
GTGTTGGTCA TAGGCGAGTA CCTGTTTGAA AGCGATCAAG TGCGCGCTGA ATTGGCGCAG
CGACAATCGA CACTGATAAA GCAGCAGTTG TTCCGGATGC AGAATGTGGT TCAATCGGCG
CAGGCTTTAC AGGATGTGGA GCGGATTGAG CAGGAGGTTT CCTTAGCTGC GCTGGATATG
GGCACTATGG TTTATATCTT AGTTGATGCT GATAGCCGTA TTCGTTTTGC AAACCATACT
GTTTGGCGCG ATAGCAATGC CATGCAAGTC ATTGATGGTT ATGATGCTAC TCGTCATCGT
GCTGTGGTTC AGGCTTTCCT GCCACAAATT CTCGTTAATC TCGAACGCTT AACCATTCAA
GCATATTATC CCGTCTTGCC TCAGTATGGT GGTGCGGTTG ATTTGATTTA TCTTGAAGCC
GATTTAGCGC CTTTAGTTGC CGAAGCTTCC GCTAAGTTAC AACAACGTTT TATGCGGGTT
TGGGGGCTGG GTGGATTATT ACTGATTGGT TTTACCTTCA TTCTCTATTT CCTGTTGATC
CGTCCATTCC AAATATTAAG CGAGGCCGCT AAACAGGTAG GAACTTCTTC CTTTTCGACA
TCGATCCCTT GGAGCTCATC AGAAGTCTTA TCATTGCAAG CCAGTTTGCA ACAGGTACAT
GAACGTTTGA GTCGTGCTGT GAAACAGTTG AATGACAGTG AACTGCGCTG GCTGTTTGCG
GTGGAAGGCT CGCGGAACGG TATTTGGGAT TGGGATATCA GCACGGGTGA GGTTTTTCTT
TCTGATCGCT GGAAAGAGAT GATCGGTTAT GCACCGGATG AATTAGCTGG CGTATTCCAG
ACTTGGGAAA CGCGGTTACA TCCCGATGAT AGGGATATCG TACTTGATGC GTTGCAGGAG
TACGTTAGCG GTAAGAGTAA GGAATTTGAA AGTGTCCATC GCCTGCGACA TAGAGAGGGG
CATTATGTGT GGGTGCTGGA TCGCGGCATG TTGGTTGATT GGGACCCTCA AGGACGTCCG
ACTCGGATGA TCGGCATTCA TATGGATGTG TCAGAAAGTG CCAAGAACCA TGCTGCGATT
AATGAACTTG TGGATCAATC GGTTACGGGT CGCAAGATGT TACCCGATGC CTTTATGGCC
CGGCTGTCGC AATTTTTAAC CCAAGGTAAT AGCTCGGGTC AATGGGGAGC ATTGCTGCTT
GTTGAGGTGG ATAGATTAGG CTTGGTCGCG ACTCTAAACT CCCACGAATT AGAGCGCTTA
CTCACGCAAG TGGCTGCACG TCTATCGAGT TATTTTACTG AGAATATTAC CGTTGGCCGA
TTGGAGTCCG GTGATTTTGT TTTGCTGGCT AAAGACTTAG CGATAGATGC TTCAGTGGCT
GCGCGTCGTG CTTTAGCGCT TGCGAGTGAG TTAAGGCAAG TGATTGCTCG ACCATTCCAT
TACGGTCATC ATCACTTTGA GCTCAGCGCG AATGTGGGGA TTTGTTTGCT CGACAGCATA
GAGACCTTAG ATCCAGCTTT AGTCATGCGC CGCGCTGAGT TAGCAACCTT GAGTGCCAAG
CGACCTGGGC AAGCGGGATG CGCTTTCTAT CATGCTGAGA TGGATTTACG TCAGAGCCGT
GATGAACAGT TACAACAGGA ATTACAGACG GCATTACAGC AAGATAGCAT GACGTTAATG
TTCCAACCTG TGATGAATGC GCACAGTGAA TTGGTCTCGG CTGAAGTGCT CACGCGTTGG
TATCGTGCTG ATGGCGAGTT TATCCCGCCT GCAGAGTTTG TAGCGTTAGC CGAACAGGGA
GGAATGATTG CTGAACTCGA TCTTTGGGTC GCTAAACGTG TGTGTCAGTT TATTCAGACA
TCCCATGCCC AAGGCCGGAG TTTGCCGACT TTAACTCTTA ATATCAGTGC ATTCTCATTT
GGTCAGGCAG ATTTTGTTGA TGCATTGGTT GCCTTAGTTA AAGAGCATGG CATTGTGGCT
CATCAACTGG GTATTGAGCT CAATGAGGCC GCATTGTTAA TGCAACCACA GTTTGTGGCT
GAGCGCGTGT CTAAGTTGGT CGATGCGGGG ATAGGTATCG TCCTCGATCA TTTCGGTTCT
GGCTCGAGTG CTTTGAGTTG TTTAGCCAAC CAGCCATTAG TTGCGGTTAA ATTGGATATG
AGTTGTATTG ATTCATTAGC CGCAATGCCA CAAAGAGTGA AGGCGTTAAT TGTCTCGGCG
CAGCAGTTTA ATTTGCACGT GGTGGCTAAA GGCGTTGAAT CACCCCAACA CTATCAAGCC
TTTGTTGAAT TTGGCTGTGA TGGTTATCAG GGCTATTTAT TCAGCCGAGC GTTAAACCAA
GCGGACTTTA TCCAGCTTGT TTGTCCTCGT CCTTTATTGC GAAGCGTTTA A
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| Protein sequence | MLRKLSLAVL LPLCMLALYL VLVIGEYLFE SDQVRAELAQ RQSTLIKQQL FRMQNVVQSA
QALQDVERIE QEVSLAALDM GTMVYILVDA DSRIRFANHT VWRDSNAMQV IDGYDATRHR
AVVQAFLPQI LVNLERLTIQ AYYPVLPQYG GAVDLIYLEA DLAPLVAEAS AKLQQRFMRV
WGLGGLLLIG FTFILYFLLI RPFQILSEAA KQVGTSSFST SIPWSSSEVL SLQASLQQVH
ERLSRAVKQL NDSELRWLFA VEGSRNGIWD WDISTGEVFL SDRWKEMIGY APDELAGVFQ
TWETRLHPDD RDIVLDALQE YVSGKSKEFE SVHRLRHREG HYVWVLDRGM LVDWDPQGRP
TRMIGIHMDV SESAKNHAAI NELVDQSVTG RKMLPDAFMA RLSQFLTQGN SSGQWGALLL
VEVDRLGLVA TLNSHELERL LTQVAARLSS YFTENITVGR LESGDFVLLA KDLAIDASVA
ARRALALASE LRQVIARPFH YGHHHFELSA NVGICLLDSI ETLDPALVMR RAELATLSAK
RPGQAGCAFY HAEMDLRQSR DEQLQQELQT ALQQDSMTLM FQPVMNAHSE LVSAEVLTRW
YRADGEFIPP AEFVALAEQG GMIAELDLWV AKRVCQFIQT SHAQGRSLPT LTLNISAFSF
GQADFVDALV ALVKEHGIVA HQLGIELNEA ALLMQPQFVA ERVSKLVDAG IGIVLDHFGS
GSSALSCLAN QPLVAVKLDM SCIDSLAAMP QRVKALIVSA QQFNLHVVAK GVESPQHYQA
FVEFGCDGYQ GYLFSRALNQ ADFIQLVCPR PLLRSV
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