| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4343 |
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| Symbol | |
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| ID | 5370181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 5178478 |
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| End bp | 5179323 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832606 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001368520 |
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| Protein GI | 153002839 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000172668 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAAA TTGGCAGACT CCCCAACAGC AGAGCCGCGC AGGCATTTGT CGATTACCTC
AAAGGTGAAC ACATTGACTG CCAAATTGAG CCGCTGGAGC AAGGTGTCGC CATTCTCGTC
ATCCATGAAA AAGACCTAGA GCAAACGCGC ACGGAGTTTG CCCATTTCAT GGCTCATCCC
TACGACAGTA AATATCTGCA AGCCTCGTGG GAACACGGCG ATACCCAAAC TAAGATAGAT
TACGGCGCCC CTTCGCTACA GTTGTTTACC CAATTCATTA CCGGCGCAGG CCCAGTCACG
TTGATCGTTT TTGCGGTTTG CGTACTCATT TTTGCGGCGA TGAACTTAGG GTTCGCCAAC
CAAACCTACG CAGCACTGTC CTATTTTGGC GCGGTACCAA GTTCAGAGTT CAGCCAGTTC
TGGCGTGTTT TTACCCCAAG CCTGCTGCAT TTTTCAGCCA TGCACGTCAT CTTTAACTTG
CTCTGGTGGT GGTATTTAGG CGGTAAAATC GAAACCCGTA TCGGCACAGC GCCATTGCTA
ATCTTGCTGT TTGTGGCGGG CACACTGCCA AACGTCATCC AATATTATGT CGGTGGACCT
AACTTCGGCG GGCTATCTGG CGTTGTGTAT GCCGTGGTGG GTTACACTTG GGTCATGGGG
ATACGTAAAC CTGCTTCTGG AATAGACTTT CCACCATCAT ATATGGCCTT TATGATGATT
TGGTTGGCAT TGGGATTCAC GGATATTCTA GGGGTTGCCG TTGCGAACGG TGCCCACATT
GGTGGCTTAC TCATAGGGTT AGCCCAAGGT TTATTCGATA GCCGCAAGTC CTCAAGCTCA
GTCTAA
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| Protein sequence | MIEIGRLPNS RAAQAFVDYL KGEHIDCQIE PLEQGVAILV IHEKDLEQTR TEFAHFMAHP
YDSKYLQASW EHGDTQTKID YGAPSLQLFT QFITGAGPVT LIVFAVCVLI FAAMNLGFAN
QTYAALSYFG AVPSSEFSQF WRVFTPSLLH FSAMHVIFNL LWWWYLGGKI ETRIGTAPLL
ILLFVAGTLP NVIQYYVGGP NFGGLSGVVY AVVGYTWVMG IRKPASGIDF PPSYMAFMMI
WLALGFTDIL GVAVANGAHI GGLLIGLAQG LFDSRKSSSS V
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