Gene Shew185_4339 details

Gene Information

• Locus tag: Shew185_4339
• ID: 5370013
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 5174909
• End bp: 5175556
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640832602
• Product: TetR family transcriptional regulator
• Protein accession: YP_001368516
• Protein GI: 153002835
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCC GCGACAAAAT AATCTATGCC AGTCTTGAAC TGTTCAACGA GCATGGCGAA 
AGAAACATCA CCACCAATCA CATTGCCGCT CACTTAAATA TGAGTCCCGG GAATCTTTAT 
TACCATTTTC GCAATAAAGA AGACATTATC CGCTGCATTT TCAGCTTATA TGAGAATCAT 
CTCGAATCGG GTTTCCAACC CTATGAAGAT AAGCAAGTGG ATGTGGAACT GTTAATCGGC 
TACTTCGATG CGATGTTCTA TACCTTGTGG CAATTCCGCT TCATGTACGC CAACCTTGCG 
GATATTCTCG CCCGCGATGA AGAGCTAAAA AAACGTTATT TGCATGCACA GCAACAAGTC 
TTAACACGTT CGAGCCACGT GCTGCATAAA CTTAAGCAAG ATGGCTTTTT ACACTTAGAG 
AGCGACAAAA TCACGCCACT GGCGGATACC ATCAAGATGA TCGTCAGCTT TTGGATCGGC 
TACCAACTCA CGCAATCCAG CACGTCGACC ATCACTAAAG CGACGCTCTA TGAAGGTGTA 
TTGAGGGTAC TGATGATTTT CAAAGCCTAT GCAACCCCGA CATCGGTCGC GACGTTTACT 
CGCCTAGAGC AGCATTATCA CGCGTTAGCG AATCAAGAAT CCCTCTAG 

 

Protein sequence

MKTRDKIIYA SLELFNEHGE RNITTNHIAA HLNMSPGNLY YHFRNKEDII RCIFSLYENH 
LESGFQPYED KQVDVELLIG YFDAMFYTLW QFRFMYANLA DILARDEELK KRYLHAQQQV 
LTRSSHVLHK LKQDGFLHLE SDKITPLADT IKMIVSFWIG YQLTQSSTST ITKATLYEGV 
LRVLMIFKAY ATPTSVATFT RLEQHYHALA NQESL