| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4336 |
|---|
| Symbol | |
|---|
| ID | 5370049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 5171576 |
|---|
| End bp | 5172619 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640832599 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001368513 |
|---|
| Protein GI | 153002832 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAA ATTCCAATAC CATGAATTCC CTTTGTTTGC TTCGCTTATC CGCAATCGGT
GACGTCTGTC ATGCCGTGGC TATGGTGCAG GCGATTCAGC GGCAATACCC CGAGCTCAAA
ATCACATGGG TGATCGGTAA ACTCGAATAT CAATTGTTGA AGCATTTACC CGGCATTGAG
TTTGTTATTT TTGATAAATC TCAAGGATGG CGTAGTTATT TTAATTTACG TAAGGCATTA
AAAGGCCGAC GTTTTGACGT GCTGCTGCAT ATGCAGGTTG CGCTACGTGC CACTTTGGCT
TCATTAGCCA TCTCGGCAAA AGTGCGCATA GGTTTCGATC GTGCTCGTGC CAAAGAAGGT
CAGTGGCTAG TGACGAATCG TAGGGTTGAG CCCTTGGCCA AGCCCCATGT GCTCGATGGT
TTTATGGGCT TCGCCAAAGC GATTGGCGTC AAGGATCTCA CTCCCCAATG GCATATCCCT
GTACCAATTG CGGATACTGA GTTTGCCCAG ACGCAGATTA AAGACAATGA AAAAGTCTTT
ATCATTTGCG CTGCAGCCAG TAAGGCTGAA CGTAATTGGT TGCCCGAGCG TTATGCCGCC
GTCGCGAGTT ATGCGATTGC GAAAGGATTT AGAGTCATGC TGTGCGGTGG CCCAACTCAA
CTTGAGAAGG ATTTAGTAGA GCAAATTTTG CAGGCGTGCC CTTCTAAAAT CGATAATTTA
GTGGGCAAAA CCAGTTTGAC TCAACTCTTA GCACTGCTAA AACGCGCCAG TTTAGTGTTA
GCGCCTGATA CGGGTCCTGC GCATATGGCG GTGACCCAAG GCACGCCAGT CATTGGTTTA
TATGCCCATT CAAATCCTGG GCGCACTGGT CCGTATTTAT CGCAGCAATA TGTGGCGAGC
GTCTATGATG AGGCGATAGC ATCCCAACAT AGTGGCGAAG TTAAGTGGGG CACTCGCGCC
AAAGGCGAGC ATTTGATGGC GTTGATCAGT GTTGAAGCCG TGATTGAGAA GTTTGAGTTA
GTGGTTCAGC AGACACTCAG TTAA
|
|---|
| Protein sequence | MSLNSNTMNS LCLLRLSAIG DVCHAVAMVQ AIQRQYPELK ITWVIGKLEY QLLKHLPGIE
FVIFDKSQGW RSYFNLRKAL KGRRFDVLLH MQVALRATLA SLAISAKVRI GFDRARAKEG
QWLVTNRRVE PLAKPHVLDG FMGFAKAIGV KDLTPQWHIP VPIADTEFAQ TQIKDNEKVF
IICAAASKAE RNWLPERYAA VASYAIAKGF RVMLCGGPTQ LEKDLVEQIL QACPSKIDNL
VGKTSLTQLL ALLKRASLVL APDTGPAHMA VTQGTPVIGL YAHSNPGRTG PYLSQQYVAS
VYDEAIASQH SGEVKWGTRA KGEHLMALIS VEAVIEKFEL VVQQTLS
|
|---|
| |