Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4282 |
Symbol | |
ID | 5370804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 5108133 |
End bp | 5110268 |
Gene Length | 2136 bp |
Protein Length | 711 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640832545 |
Product | fusaric acid resistance protein region |
Protein accession | YP_001368459 |
Protein GI | 153002778 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCTGT TACTGAAGAG TTTATTCTTT CCAGACCGAC GAACCCTCAT CTTCGCGATT AAGGGCGTGA TCTCGATGGC GCTCGCCTTA TATGTGGCCA TGTTCTTAAA TCTAGAACGA CCATATTGGG CGCTGGTGTC GGCGGTATTT CTGCAAATCC GCCCTGAAAG CGGGCTCGTG ATCGAAAAGG GCTTATGCCA AATCGGCGGC ACCTTAGTCG GCGCGCTCGC GGGGATTGCC ATACTCAACT GGTTTACGCC CTATCCCGAA CTCGCCTTAG GATTACTCGC CTGCTGGATA GGGCTAAATT CTGGGTTGTC GGCCATGGTA CGCCAGCAAA ACTTTGTCTA TGCCTTTGCT ATGGCGGGCA TGACCGCCTG CTTGATAGTG CTCATTGTGA TGGCAAGCCC AAGCACGGCC GATAGCGCAA AAATATTCGA TGTGGCGCAG TCGAGGATCA GCGAGATTGT CGTCGGGGCG ATTTGCGCCG TTTTAGTCAG CTCGCTACTT TGGCCGACCA AGGTAAAATA TAGTCTGCAA TTGCATGCTA AAAACACCAT TAATCATACG CTTAACTATC TTGCATTAGA ACTCGATTTA CAGGGGGAAC ATGCGAGTCG CCATGAACAT ATCGACACGA TTATGGAGTC AGTATCGGCA CTAAGTGACG ACTCCAGCGC GGTAATTTAT GAAGGCCCCG AAGGACGCGG GCAGAGCCAT GCGGCGAACT TTCTCTGCAA TAAAACCCTT TCGCTATTGG CAGCAATCCA AATATTTGGC CGGCTGCAAC GTAATCATTC CCATCTTGTT AGCGAACCAC TCGCGAAAAC CTTAGCCAAT ATGCGCAGCA GTTTTACCTT GATGGCGCAA TCCAGTGATT ACCAAGAATG CTACAAAATG GCGCGCACCT TGAGGTATCA ACTCCAACAA AACCTGATGC AATACCGCGA CCGCGCGCCG CTAGAGACAC GCTTACTCAA AGTCGCGATG GAATTAAGCG CCGATCTGAT CATGGTGCTC AAGAGCTACA ACGTGCTGAC CAGTCATTCT GCGGTGCAGC TCAACGCGCC GCCAATGGAG TTTCACCGAG ACCCATTAAT AGGCGTTACC ACGGGCCTGC GCAGCATGGC GGTGTTTGTC ATTGGGGCTT CACTGTGGAT TGGCACAGGG TCGAGCGCGG TCCTCATGAT GATCCTGCTG CCCGTGGTCT TTTCCATCAT GATGGCACGC CAACCACTGC CGATGTTAAC CACGATTTTG CGGCGTATTC TTGTCGGCAT CACTATCGCA GTACCGCTCA CAGTGTTTTA CGCTTTACCT TTGCTGGCAC AGAGTAGCGG CGATTTTGAA ATCCTGGTTT TAGTGCTCGC TGGGCCGTTT TTTATTGGCT TACTCGCCTT GGCGAATCGA CCGACCTTGC CCTATGGGCT CGGCATTTGC GTGCCGTTTG CTGTGTTAGT GCAGCCCAGC AACACCATTT CATTTGCGAT AGAAAACACC GTCAGCAATG CCTTAGCGAT TTTTGTTGGC GTTACTGTGC TGTATTGGTT GTTTAAATTG ATAACCGAAC CTAGCCAGCG GTTGATGCAA TATCGTCTAC TGCAATCCAT CCAAAAAGAT CTGGTGCATA TCGCGCAGCA TGATGATCCT GAGCCTTGGT TTAACGCCCG CATGGGCGAT CGACTGCTGC GGATCGCCAG TTACGAAAAA GGCTCGGGCA AGAGTTCGAG GGTATTTACC GATCTGGTGT TTACGGCGCT TAATCTAGGC CATGTGTCGA TTAGGATGCG GCGCATGTTG CAGGGCATTT CAGATACGCA CTTAAACTTA GGCTTAGAAA ATGCACTCAA CCTCTGGCAA CACAATTTAG GTCAGGCATT TATCGCCTGC GCCCACGGAC AAGTCGCAGA AGAGTTTAAA ATCAGCAGCG AGGCCTTATT ACAAGCGCTG GCCCAATGTC CGTTACCCCA CGAACAATTC ACTATGATTA CTGGGATGTT TGAACGCATC ACTTTAACCT TCGAACGCAC TGCCCACAGT ATTGCCGAGC AGAAAAACAC CTCAAAAAAA ATAGTCAGTT CTCAAACTAT TTTTCGCCCC AAAAGCCACT CTTTTGCTGC CACCAAAACC ATTTAA
|
Protein sequence | MALLLKSLFF PDRRTLIFAI KGVISMALAL YVAMFLNLER PYWALVSAVF LQIRPESGLV IEKGLCQIGG TLVGALAGIA ILNWFTPYPE LALGLLACWI GLNSGLSAMV RQQNFVYAFA MAGMTACLIV LIVMASPSTA DSAKIFDVAQ SRISEIVVGA ICAVLVSSLL WPTKVKYSLQ LHAKNTINHT LNYLALELDL QGEHASRHEH IDTIMESVSA LSDDSSAVIY EGPEGRGQSH AANFLCNKTL SLLAAIQIFG RLQRNHSHLV SEPLAKTLAN MRSSFTLMAQ SSDYQECYKM ARTLRYQLQQ NLMQYRDRAP LETRLLKVAM ELSADLIMVL KSYNVLTSHS AVQLNAPPME FHRDPLIGVT TGLRSMAVFV IGASLWIGTG SSAVLMMILL PVVFSIMMAR QPLPMLTTIL RRILVGITIA VPLTVFYALP LLAQSSGDFE ILVLVLAGPF FIGLLALANR PTLPYGLGIC VPFAVLVQPS NTISFAIENT VSNALAIFVG VTVLYWLFKL ITEPSQRLMQ YRLLQSIQKD LVHIAQHDDP EPWFNARMGD RLLRIASYEK GSGKSSRVFT DLVFTALNLG HVSIRMRRML QGISDTHLNL GLENALNLWQ HNLGQAFIAC AHGQVAEEFK ISSEALLQAL AQCPLPHEQF TMITGMFERI TLTFERTAHS IAEQKNTSKK IVSSQTIFRP KSHSFAATKT I
|
| |