Gene Shew185_4282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4282 
Symbol 
ID5370804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5108133 
End bp5110268 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content50% 
IMG OID640832545 
Productfusaric acid resistance protein region 
Protein accessionYP_001368459 
Protein GI153002778 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGT TACTGAAGAG TTTATTCTTT CCAGACCGAC GAACCCTCAT CTTCGCGATT 
AAGGGCGTGA TCTCGATGGC GCTCGCCTTA TATGTGGCCA TGTTCTTAAA TCTAGAACGA
CCATATTGGG CGCTGGTGTC GGCGGTATTT CTGCAAATCC GCCCTGAAAG CGGGCTCGTG
ATCGAAAAGG GCTTATGCCA AATCGGCGGC ACCTTAGTCG GCGCGCTCGC GGGGATTGCC
ATACTCAACT GGTTTACGCC CTATCCCGAA CTCGCCTTAG GATTACTCGC CTGCTGGATA
GGGCTAAATT CTGGGTTGTC GGCCATGGTA CGCCAGCAAA ACTTTGTCTA TGCCTTTGCT
ATGGCGGGCA TGACCGCCTG CTTGATAGTG CTCATTGTGA TGGCAAGCCC AAGCACGGCC
GATAGCGCAA AAATATTCGA TGTGGCGCAG TCGAGGATCA GCGAGATTGT CGTCGGGGCG
ATTTGCGCCG TTTTAGTCAG CTCGCTACTT TGGCCGACCA AGGTAAAATA TAGTCTGCAA
TTGCATGCTA AAAACACCAT TAATCATACG CTTAACTATC TTGCATTAGA ACTCGATTTA
CAGGGGGAAC ATGCGAGTCG CCATGAACAT ATCGACACGA TTATGGAGTC AGTATCGGCA
CTAAGTGACG ACTCCAGCGC GGTAATTTAT GAAGGCCCCG AAGGACGCGG GCAGAGCCAT
GCGGCGAACT TTCTCTGCAA TAAAACCCTT TCGCTATTGG CAGCAATCCA AATATTTGGC
CGGCTGCAAC GTAATCATTC CCATCTTGTT AGCGAACCAC TCGCGAAAAC CTTAGCCAAT
ATGCGCAGCA GTTTTACCTT GATGGCGCAA TCCAGTGATT ACCAAGAATG CTACAAAATG
GCGCGCACCT TGAGGTATCA ACTCCAACAA AACCTGATGC AATACCGCGA CCGCGCGCCG
CTAGAGACAC GCTTACTCAA AGTCGCGATG GAATTAAGCG CCGATCTGAT CATGGTGCTC
AAGAGCTACA ACGTGCTGAC CAGTCATTCT GCGGTGCAGC TCAACGCGCC GCCAATGGAG
TTTCACCGAG ACCCATTAAT AGGCGTTACC ACGGGCCTGC GCAGCATGGC GGTGTTTGTC
ATTGGGGCTT CACTGTGGAT TGGCACAGGG TCGAGCGCGG TCCTCATGAT GATCCTGCTG
CCCGTGGTCT TTTCCATCAT GATGGCACGC CAACCACTGC CGATGTTAAC CACGATTTTG
CGGCGTATTC TTGTCGGCAT CACTATCGCA GTACCGCTCA CAGTGTTTTA CGCTTTACCT
TTGCTGGCAC AGAGTAGCGG CGATTTTGAA ATCCTGGTTT TAGTGCTCGC TGGGCCGTTT
TTTATTGGCT TACTCGCCTT GGCGAATCGA CCGACCTTGC CCTATGGGCT CGGCATTTGC
GTGCCGTTTG CTGTGTTAGT GCAGCCCAGC AACACCATTT CATTTGCGAT AGAAAACACC
GTCAGCAATG CCTTAGCGAT TTTTGTTGGC GTTACTGTGC TGTATTGGTT GTTTAAATTG
ATAACCGAAC CTAGCCAGCG GTTGATGCAA TATCGTCTAC TGCAATCCAT CCAAAAAGAT
CTGGTGCATA TCGCGCAGCA TGATGATCCT GAGCCTTGGT TTAACGCCCG CATGGGCGAT
CGACTGCTGC GGATCGCCAG TTACGAAAAA GGCTCGGGCA AGAGTTCGAG GGTATTTACC
GATCTGGTGT TTACGGCGCT TAATCTAGGC CATGTGTCGA TTAGGATGCG GCGCATGTTG
CAGGGCATTT CAGATACGCA CTTAAACTTA GGCTTAGAAA ATGCACTCAA CCTCTGGCAA
CACAATTTAG GTCAGGCATT TATCGCCTGC GCCCACGGAC AAGTCGCAGA AGAGTTTAAA
ATCAGCAGCG AGGCCTTATT ACAAGCGCTG GCCCAATGTC CGTTACCCCA CGAACAATTC
ACTATGATTA CTGGGATGTT TGAACGCATC ACTTTAACCT TCGAACGCAC TGCCCACAGT
ATTGCCGAGC AGAAAAACAC CTCAAAAAAA ATAGTCAGTT CTCAAACTAT TTTTCGCCCC
AAAAGCCACT CTTTTGCTGC CACCAAAACC ATTTAA
 
Protein sequence
MALLLKSLFF PDRRTLIFAI KGVISMALAL YVAMFLNLER PYWALVSAVF LQIRPESGLV 
IEKGLCQIGG TLVGALAGIA ILNWFTPYPE LALGLLACWI GLNSGLSAMV RQQNFVYAFA
MAGMTACLIV LIVMASPSTA DSAKIFDVAQ SRISEIVVGA ICAVLVSSLL WPTKVKYSLQ
LHAKNTINHT LNYLALELDL QGEHASRHEH IDTIMESVSA LSDDSSAVIY EGPEGRGQSH
AANFLCNKTL SLLAAIQIFG RLQRNHSHLV SEPLAKTLAN MRSSFTLMAQ SSDYQECYKM
ARTLRYQLQQ NLMQYRDRAP LETRLLKVAM ELSADLIMVL KSYNVLTSHS AVQLNAPPME
FHRDPLIGVT TGLRSMAVFV IGASLWIGTG SSAVLMMILL PVVFSIMMAR QPLPMLTTIL
RRILVGITIA VPLTVFYALP LLAQSSGDFE ILVLVLAGPF FIGLLALANR PTLPYGLGIC
VPFAVLVQPS NTISFAIENT VSNALAIFVG VTVLYWLFKL ITEPSQRLMQ YRLLQSIQKD
LVHIAQHDDP EPWFNARMGD RLLRIASYEK GSGKSSRVFT DLVFTALNLG HVSIRMRRML
QGISDTHLNL GLENALNLWQ HNLGQAFIAC AHGQVAEEFK ISSEALLQAL AQCPLPHEQF
TMITGMFERI TLTFERTAHS IAEQKNTSKK IVSSQTIFRP KSHSFAATKT I