Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4256 |
Symbol | |
ID | 5371432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 5072413 |
End bp | 5074452 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640832521 |
Product | oligopeptidase A |
Protein accession | YP_001368435 |
Protein GI | 153002754 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0339] Zn-dependent oligopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACC CTTTGCTTAG CGGCGCAAAA TTACCGCTTT TTTCACAGAT TAAACCGGAA CATATTCAAG TCGCCGTTGA GCATGCCATT GCTCAGTGCC GCACTAAGAT TGATGAAGTG CTGCAGAATC AAGGTCCTTA CACTTGGGAC AACTTGGTCG CGCCACTAGA ACAGGTTGAC GATGAACTAA GCCAAATTTG GTCGCCGGTT TCCCATATGA ATTCAGTGAC CAGCACAGAT GAGTGGCGTG CTGCCCACGA TGCTTGTTTA CCTCTTTTAT CGGAATACGG TACTTACGTT GGTCAACATC AAGGTTTATA TCAAGCCTAT AAGGCCCTGC GTGCATCGGA TGAATTTGCT CAATTGAGCC AAGCGCAGCA GAGGGTGATA GAGCACAGCC TGCGCGATTT TGAACTATCG GGTATTGGCT TAGATGATGC GCAAAAAGTG CGTTATGGCG AAATGGTCAA ACGTCTCTCT GAGCTCACCA GTGGCTTTTC GAATCAATTA CTGGATGCGA CCCAAGCTTG GACTAAGTTG ATCACAGATG AAGCTGAGCT TGCGGGTTTG CCAGAGTCTG CCAAAGCCGC CGCTAAGGCG ATGGCTGATG CGCGTGAGTT AGACGGTTGG TTATTTACCT TAGATTTTCC TTCTTATTTA CCTGTTATGA CTTACAGTGA AAACCGTAGC CTTCGCGAAG AGTGTTACCG CGCCTTCGTT ACGCGCGCTT CAGATCAAGG TCCCAATGCC GGCGAATTTG ATAACAGCCC GCTGATGGAT GAGATCCTCG CGCTGCGCCA TGAATTGGCA CAGTTATTAG GTTTTGATAG CTTTGCCGAA AAATCCCTCG CCACCAAAAT GGCTGAAACC CCGGCGCAGG TGATGGCATT TTTAAATGAG CTAGCGCTGC GCTCAAAGGA TCAGGCTAAA GCTGAATTGG CCGAGCTGAG AGCGTTTGCC GAGGCGGAAT ACGGCGTGAG CGAAATGGCA TCTTGGGACT TAAGTTTCTA TGCCGAGAAG TTGCAGCAGC ATAAGTATGA GATTTCACAG GAAATCCTGC GTCCATACTT CCCCGAAGAT AAAGTGCTCT CGGGTTTGTT CTACACAGTA TCGCGTTTAT TCGGCCTTAA GATTGTCGAG CAAAAAGACC TTGACCGTTG GCATAAGGAC GTGCGTTTCT TCGATATTTT CGACGAAACC GGCGAACACA GAGGCAGTTT TTACCTCGAC TTATATGCCC GCATGGGTAA GCGTGGTGGC GCTTGGATGG ATGACTGCCG CGTACGCCGT CAAACCGCCG ATGGATTACA AAAGCCAGTG GCTTATTTGA CCTGTAACTT TAATGGCCCG GTCGATGGCA AACCTGCGCT GTTTACCCAT GATGAAGTGA CAACCCTGTT CCACGAATTT GGCCATGGTA TTCACCATAT GCTGACCAAA ATCGATGTTG CAGGCGTGTC GGGTATCAAT GGAGTGCCCT GGGATGCGGT CGAGCTACCA AGTCAATTTA TGGAGAACTG GTGCTGGCAG GAAGAGGCAT TAGCCGAAAT TTCTGGCCAC TTCGAAACGG GCGAGCCATT ACCTAAAGCC TTGTTGGATA AGATGCTGGC GGCGAAAAAC TTCCAATCTG GCATGATGAT GTTGCGTCAA CTCGAGTTTT CGCTGTTCGA TTTTAGAATG CACCACGAAT ACGACCCAGC AAAAGGCGCG CGTATTCAAG AAACCTTAGA CGAAGTGCGT CGTCAGGTGG CCGTATTAAC GCCGCCAGAT TTTAACCGTT TCCAACATGG TTTTGCCCAT ATTTTTGCGG GCGGTTATGC CGCAGGTTAT TACAGCTATA AATGGGCTGA AGTGCTGTCG GCGGATGCGT TTTCTCGCTT CGAAGAGGAA GGGATTTTCA ACCCTGAAAC GGGTCGTCGT TTCCTGCACA ATATCCTCGA AATGGGTGGT TCAGCCGAGC CGATGGACTT GTTTAAACAG TTTATGGGAC GCGAGCCGAA TATTGATGCC CTGTTAAGAC ATTCGGGCAT TGCGGCATAG
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Protein sequence | MSNPLLSGAK LPLFSQIKPE HIQVAVEHAI AQCRTKIDEV LQNQGPYTWD NLVAPLEQVD DELSQIWSPV SHMNSVTSTD EWRAAHDACL PLLSEYGTYV GQHQGLYQAY KALRASDEFA QLSQAQQRVI EHSLRDFELS GIGLDDAQKV RYGEMVKRLS ELTSGFSNQL LDATQAWTKL ITDEAELAGL PESAKAAAKA MADARELDGW LFTLDFPSYL PVMTYSENRS LREECYRAFV TRASDQGPNA GEFDNSPLMD EILALRHELA QLLGFDSFAE KSLATKMAET PAQVMAFLNE LALRSKDQAK AELAELRAFA EAEYGVSEMA SWDLSFYAEK LQQHKYEISQ EILRPYFPED KVLSGLFYTV SRLFGLKIVE QKDLDRWHKD VRFFDIFDET GEHRGSFYLD LYARMGKRGG AWMDDCRVRR QTADGLQKPV AYLTCNFNGP VDGKPALFTH DEVTTLFHEF GHGIHHMLTK IDVAGVSGIN GVPWDAVELP SQFMENWCWQ EEALAEISGH FETGEPLPKA LLDKMLAAKN FQSGMMMLRQ LEFSLFDFRM HHEYDPAKGA RIQETLDEVR RQVAVLTPPD FNRFQHGFAH IFAGGYAAGY YSYKWAEVLS ADAFSRFEEE GIFNPETGRR FLHNILEMGG SAEPMDLFKQ FMGREPNIDA LLRHSGIAA
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