Gene Shew185_4256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4256 
Symbol 
ID5371432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5072413 
End bp5074452 
Gene Length2040 bp 
Protein Length679 aa 
Translation table11 
GC content49% 
IMG OID640832521 
Productoligopeptidase A 
Protein accessionYP_001368435 
Protein GI153002754 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACC CTTTGCTTAG CGGCGCAAAA TTACCGCTTT TTTCACAGAT TAAACCGGAA 
CATATTCAAG TCGCCGTTGA GCATGCCATT GCTCAGTGCC GCACTAAGAT TGATGAAGTG
CTGCAGAATC AAGGTCCTTA CACTTGGGAC AACTTGGTCG CGCCACTAGA ACAGGTTGAC
GATGAACTAA GCCAAATTTG GTCGCCGGTT TCCCATATGA ATTCAGTGAC CAGCACAGAT
GAGTGGCGTG CTGCCCACGA TGCTTGTTTA CCTCTTTTAT CGGAATACGG TACTTACGTT
GGTCAACATC AAGGTTTATA TCAAGCCTAT AAGGCCCTGC GTGCATCGGA TGAATTTGCT
CAATTGAGCC AAGCGCAGCA GAGGGTGATA GAGCACAGCC TGCGCGATTT TGAACTATCG
GGTATTGGCT TAGATGATGC GCAAAAAGTG CGTTATGGCG AAATGGTCAA ACGTCTCTCT
GAGCTCACCA GTGGCTTTTC GAATCAATTA CTGGATGCGA CCCAAGCTTG GACTAAGTTG
ATCACAGATG AAGCTGAGCT TGCGGGTTTG CCAGAGTCTG CCAAAGCCGC CGCTAAGGCG
ATGGCTGATG CGCGTGAGTT AGACGGTTGG TTATTTACCT TAGATTTTCC TTCTTATTTA
CCTGTTATGA CTTACAGTGA AAACCGTAGC CTTCGCGAAG AGTGTTACCG CGCCTTCGTT
ACGCGCGCTT CAGATCAAGG TCCCAATGCC GGCGAATTTG ATAACAGCCC GCTGATGGAT
GAGATCCTCG CGCTGCGCCA TGAATTGGCA CAGTTATTAG GTTTTGATAG CTTTGCCGAA
AAATCCCTCG CCACCAAAAT GGCTGAAACC CCGGCGCAGG TGATGGCATT TTTAAATGAG
CTAGCGCTGC GCTCAAAGGA TCAGGCTAAA GCTGAATTGG CCGAGCTGAG AGCGTTTGCC
GAGGCGGAAT ACGGCGTGAG CGAAATGGCA TCTTGGGACT TAAGTTTCTA TGCCGAGAAG
TTGCAGCAGC ATAAGTATGA GATTTCACAG GAAATCCTGC GTCCATACTT CCCCGAAGAT
AAAGTGCTCT CGGGTTTGTT CTACACAGTA TCGCGTTTAT TCGGCCTTAA GATTGTCGAG
CAAAAAGACC TTGACCGTTG GCATAAGGAC GTGCGTTTCT TCGATATTTT CGACGAAACC
GGCGAACACA GAGGCAGTTT TTACCTCGAC TTATATGCCC GCATGGGTAA GCGTGGTGGC
GCTTGGATGG ATGACTGCCG CGTACGCCGT CAAACCGCCG ATGGATTACA AAAGCCAGTG
GCTTATTTGA CCTGTAACTT TAATGGCCCG GTCGATGGCA AACCTGCGCT GTTTACCCAT
GATGAAGTGA CAACCCTGTT CCACGAATTT GGCCATGGTA TTCACCATAT GCTGACCAAA
ATCGATGTTG CAGGCGTGTC GGGTATCAAT GGAGTGCCCT GGGATGCGGT CGAGCTACCA
AGTCAATTTA TGGAGAACTG GTGCTGGCAG GAAGAGGCAT TAGCCGAAAT TTCTGGCCAC
TTCGAAACGG GCGAGCCATT ACCTAAAGCC TTGTTGGATA AGATGCTGGC GGCGAAAAAC
TTCCAATCTG GCATGATGAT GTTGCGTCAA CTCGAGTTTT CGCTGTTCGA TTTTAGAATG
CACCACGAAT ACGACCCAGC AAAAGGCGCG CGTATTCAAG AAACCTTAGA CGAAGTGCGT
CGTCAGGTGG CCGTATTAAC GCCGCCAGAT TTTAACCGTT TCCAACATGG TTTTGCCCAT
ATTTTTGCGG GCGGTTATGC CGCAGGTTAT TACAGCTATA AATGGGCTGA AGTGCTGTCG
GCGGATGCGT TTTCTCGCTT CGAAGAGGAA GGGATTTTCA ACCCTGAAAC GGGTCGTCGT
TTCCTGCACA ATATCCTCGA AATGGGTGGT TCAGCCGAGC CGATGGACTT GTTTAAACAG
TTTATGGGAC GCGAGCCGAA TATTGATGCC CTGTTAAGAC ATTCGGGCAT TGCGGCATAG
 
Protein sequence
MSNPLLSGAK LPLFSQIKPE HIQVAVEHAI AQCRTKIDEV LQNQGPYTWD NLVAPLEQVD 
DELSQIWSPV SHMNSVTSTD EWRAAHDACL PLLSEYGTYV GQHQGLYQAY KALRASDEFA
QLSQAQQRVI EHSLRDFELS GIGLDDAQKV RYGEMVKRLS ELTSGFSNQL LDATQAWTKL
ITDEAELAGL PESAKAAAKA MADARELDGW LFTLDFPSYL PVMTYSENRS LREECYRAFV
TRASDQGPNA GEFDNSPLMD EILALRHELA QLLGFDSFAE KSLATKMAET PAQVMAFLNE
LALRSKDQAK AELAELRAFA EAEYGVSEMA SWDLSFYAEK LQQHKYEISQ EILRPYFPED
KVLSGLFYTV SRLFGLKIVE QKDLDRWHKD VRFFDIFDET GEHRGSFYLD LYARMGKRGG
AWMDDCRVRR QTADGLQKPV AYLTCNFNGP VDGKPALFTH DEVTTLFHEF GHGIHHMLTK
IDVAGVSGIN GVPWDAVELP SQFMENWCWQ EEALAEISGH FETGEPLPKA LLDKMLAAKN
FQSGMMMLRQ LEFSLFDFRM HHEYDPAKGA RIQETLDEVR RQVAVLTPPD FNRFQHGFAH
IFAGGYAAGY YSYKWAEVLS ADAFSRFEEE GIFNPETGRR FLHNILEMGG SAEPMDLFKQ
FMGREPNIDA LLRHSGIAA