| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4251 |
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| Symbol | |
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| ID | 5372708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5067207 |
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| End bp | 5068352 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640832516 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001368430 |
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| Protein GI | 153002749 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.397426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCAGA CAATTAAACT TGCCTCAGTT ATAAGCGTGG CGTTATGGAT GGCAGCTTGC
AGCCCTCAAG AAGAGAAAGC TCAGGCGGGC GCTGGCCCAC GTAGTATGGA AGTGGGAATC
CTTAATGTTG TTGCCCAGCC ACAAGTGATT CAGGTGGAAT TACCAGGACG CAGTAAAGCT
TTCCTCGAGG CCGAAGTTCG TCCACAGGTG AGCGGTATTA TCACTAAGCG TAGTTTTGTT
GAAGGTGGCA ATGTGAAACA GGGTGAATCC TTGTATCAAA TTGACTCTGC AACTTATAAA
GCCGCATTAG TGAGTGCCAA TGCCGATTTA GCCAGAGCCA ATGCTGGTTT AGCCTCAGCA
AAAGCTAAGG CTGCACGTTA TCAGCAACTG GTGAAAACCA ACGCCATCAG TAAGCAAGAA
TTTGATGAAG CTGAAGCGGC ATATAAAGAA GCATTAGCGA ATGTCACCGT GGCAGAAGCT
GCGATTAACA CCGCTAAAAT CAACCTGCAA TACACTGAAG TATTAGCGCC TATCTCTGGT
CGTATCGGTA AATCGAGTGT GACTGCGGGT GCGTTAGTGA CAGCGAACCA AAGCCAAACG
CTAGCGACGA TTCAACAACT TGATCCAATC AATGTGGATA TCGCGCAATC GAGTGCACAG
TTGTTACGTC TTAAAGCTAA GTTGCAGCAA GGTAAGCTAC AAGCTTCAGA AAATGCTGAT
GTGCAGTTGT TGCTCGAAGA TGGCACTCAA TACAGCCATC TAGGTAAGTT GCAGTTCGCC
GAAGTGAGTG TGGATGAAAA CACTGGATCT GTGATTCTGC GCGCCGAGTT CCCGAACCCT
GAAGGTATCT TGTTACCTGG TATGTATGTT CGCGCTATGT TGAATGCGGG CACCGATCCA
CAGGCTATCT TGGTTCCACA AAAAGCCATC ACGCGTAACT CTAAGGGTCA AGCAGTGGCT
ATGGTTGTAA ATGACCAAGG TTTAGTCGAA TTGAAAATTG TGACGACCGC TGAAGTGATT
GACAACCAAT GGCGAGTCAC TTCTGGTTTA GCTGTGGGCG ATAAATTAAT TGTGGAAGGA
TTACAGAAAA TTCGTCCAGG CGCTCCAGTA ACCACCAAAG TTATTTCTGA AACGCAAGCA
CAATAG
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| Protein sequence | MRQTIKLASV ISVALWMAAC SPQEEKAQAG AGPRSMEVGI LNVVAQPQVI QVELPGRSKA
FLEAEVRPQV SGIITKRSFV EGGNVKQGES LYQIDSATYK AALVSANADL ARANAGLASA
KAKAARYQQL VKTNAISKQE FDEAEAAYKE ALANVTVAEA AINTAKINLQ YTEVLAPISG
RIGKSSVTAG ALVTANQSQT LATIQQLDPI NVDIAQSSAQ LLRLKAKLQQ GKLQASENAD
VQLLLEDGTQ YSHLGKLQFA EVSVDENTGS VILRAEFPNP EGILLPGMYV RAMLNAGTDP
QAILVPQKAI TRNSKGQAVA MVVNDQGLVE LKIVTTAEVI DNQWRVTSGL AVGDKLIVEG
LQKIRPGAPV TTKVISETQA Q
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