| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4188 |
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| Symbol | |
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| ID | 5369991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 4991540 |
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| End bp | 4992445 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832453 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001368367 |
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| Protein GI | 153002686 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAC CACTCTCAAT CACCAGTAGC CTACCCACGT TCAGCGTGAC ATGGCGCGCC
TATTTTGAAA TGACTAAACC TAAAGTGGTC GCACTAATGC TACTCACTGT CTTAGTCGGC
ATGTGTTTGG CTGTACCCCA TGCGGTGCCA GTTCAACCTT TACTCGCGGG CATGCTGGGC
ATTGCCATGA TGGCGGGTTC GGCGGCAGCG TTGAATCATC TGATCGATCG CCGTATCGAT
GGCTTAATGG CACGCACCTA CAATCGCCCA CTACCCAAAG GGCGTATTTC GGCAACCCGC
GCGTTAATTT TCGCCGCTAG CTTAGGTAGC CTTGGCTTTA TCGTCTTATA TTCCTTAGTA
AATCCACTCA CGGCTTGGCT CACCTTTGCC AGCTTGATTG GTTATGCCTT GGTTTATACG
GCCTATTTGA AGCGCGCGAC ATCACAAAAC ATTGTGATTG GCGGCCTTGC GGGAGCCATG
CCACCCTTGC TGGGATGGAC TGCAGTGACG AACGAATTTC ACGGCCATGC GCTGTTGTTA
GTGATCATCA TTTTTACGTG GACGCCGCCA CATTTTTGGG CTCTGGCCAT TCACAGACGC
GCCGAATATG CCAAAGTGGA TATTCCCATG CTGCCCGTTA CCCACGGTGT CGAGTTTACC
AAAACCTGTA TTCTGCTTTA CACAGTATTG CTGGCAATTG CTTGCCTATT ACCTGTGCTG
GTTGGCATGT GTGGGCCCGT GTATTTCGTC TGCTCGAGTT TACTCAGCAC CGGATTTATC
TATAAAGCAT GGCAACTTAA ATATCGGGAT CATGATGGCT CGGCTATGCA AGTGTTCCGC
TTCTCTATCT ATCATTTGAT GTTGTTATTC ATGGCATTAC TGCTCGACCA CTATTTGTGG
AACTAG
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| Protein sequence | MAKPLSITSS LPTFSVTWRA YFEMTKPKVV ALMLLTVLVG MCLAVPHAVP VQPLLAGMLG
IAMMAGSAAA LNHLIDRRID GLMARTYNRP LPKGRISATR ALIFAASLGS LGFIVLYSLV
NPLTAWLTFA SLIGYALVYT AYLKRATSQN IVIGGLAGAM PPLLGWTAVT NEFHGHALLL
VIIIFTWTPP HFWALAIHRR AEYAKVDIPM LPVTHGVEFT KTCILLYTVL LAIACLLPVL
VGMCGPVYFV CSSLLSTGFI YKAWQLKYRD HDGSAMQVFR FSIYHLMLLF MALLLDHYLW
N
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