Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4139 |
Symbol | |
ID | 5370725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4940505 |
End bp | 4941476 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640832405 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001368319 |
Protein GI | 153002638 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATATCG ACAACTTAGC CAGAATCGAT CTTAACTTGC TGGTCATACT CAAAGTTCTG CTAGAAGAGC AAAGCGTGAC TCGCGCCGCC AGCCGATTAC ATATCAGCCA GTCAGCCCTC AGTAAGAGCT TAAATCGGCT CAGAGAAACC TTAGATGATC CCCTATTTCA GCGCACGGCA CACGGCTTAA AACCGACGGC GCACGCCCTA ATTCTTGGGC AAAAACTGCC GAATATTTTG CAAGACTTGT ATCAACTCAC CCAGCCTCCG ACCTTCAATC CCGCCAGTAG CAATCGACAA TTCTCCTTTG CCATGGTGGA AAGCGCCTAT GAAACCTTAA TCCCGTATTT TATTGGCCCT ATGCTGACCA CGGCGCCCAA CGTCAAACTT GACTCCTATG TCTGGACCGA AAAATCGATG CAGGATTTAC AACAAGGGCA AATTGACTTT GGTATTTCAG GGCGGGACTT GCATCCATTG TCCGATTTTC AGGTGGATCG CCTGCCCGAA GGGATTGCCT ATCAAACACT GTTTACCGAT CAACAAGTAT GTTTAGTCCG TGAAGACCAC CCGCTGATGG CGGCGCTCAC TTCAGCACAA TGGAAGCTCC CACTCTACCT CGACATGGCC CATGTGCAGG TTCGCTGTGA AGGCAGCGAT TGGTGGGCGC TGGATTACTT TCTTGCCGAT CTCGGCCATC GACGCCGGAT CAGTACGACA GTACCCGATT TTTATGGTGC CGCCAGTGTA TGCGCCCACA GCGATTTAAT CTTCACTCTG CCCTCGAGCT TTGCAAGGCA CGCCTGCCAG CTCTATCCGC TTAAACTACT GTCCTTACCC TTCGAATTTA TGCCCATGGC CTATGTATTG TTATGGCATC AAAGAAATGA TGAAGATCAG GGGCATAAAT GGATTAGAGA AACGATTTGC CAGAGTGTCG CTAAGTTATT TACTCCCGCA GAAATGCTTT AA
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Protein sequence | MNIDNLARID LNLLVILKVL LEEQSVTRAA SRLHISQSAL SKSLNRLRET LDDPLFQRTA HGLKPTAHAL ILGQKLPNIL QDLYQLTQPP TFNPASSNRQ FSFAMVESAY ETLIPYFIGP MLTTAPNVKL DSYVWTEKSM QDLQQGQIDF GISGRDLHPL SDFQVDRLPE GIAYQTLFTD QQVCLVREDH PLMAALTSAQ WKLPLYLDMA HVQVRCEGSD WWALDYFLAD LGHRRRISTT VPDFYGAASV CAHSDLIFTL PSSFARHACQ LYPLKLLSLP FEFMPMAYVL LWHQRNDEDQ GHKWIRETIC QSVAKLFTPA EML
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