Gene Shew185_4139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4139 
Symbol 
ID5370725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4940505 
End bp4941476 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content49% 
IMG OID640832405 
ProductLysR family transcriptional regulator 
Protein accessionYP_001368319 
Protein GI153002638 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATATCG ACAACTTAGC CAGAATCGAT CTTAACTTGC TGGTCATACT CAAAGTTCTG 
CTAGAAGAGC AAAGCGTGAC TCGCGCCGCC AGCCGATTAC ATATCAGCCA GTCAGCCCTC
AGTAAGAGCT TAAATCGGCT CAGAGAAACC TTAGATGATC CCCTATTTCA GCGCACGGCA
CACGGCTTAA AACCGACGGC GCACGCCCTA ATTCTTGGGC AAAAACTGCC GAATATTTTG
CAAGACTTGT ATCAACTCAC CCAGCCTCCG ACCTTCAATC CCGCCAGTAG CAATCGACAA
TTCTCCTTTG CCATGGTGGA AAGCGCCTAT GAAACCTTAA TCCCGTATTT TATTGGCCCT
ATGCTGACCA CGGCGCCCAA CGTCAAACTT GACTCCTATG TCTGGACCGA AAAATCGATG
CAGGATTTAC AACAAGGGCA AATTGACTTT GGTATTTCAG GGCGGGACTT GCATCCATTG
TCCGATTTTC AGGTGGATCG CCTGCCCGAA GGGATTGCCT ATCAAACACT GTTTACCGAT
CAACAAGTAT GTTTAGTCCG TGAAGACCAC CCGCTGATGG CGGCGCTCAC TTCAGCACAA
TGGAAGCTCC CACTCTACCT CGACATGGCC CATGTGCAGG TTCGCTGTGA AGGCAGCGAT
TGGTGGGCGC TGGATTACTT TCTTGCCGAT CTCGGCCATC GACGCCGGAT CAGTACGACA
GTACCCGATT TTTATGGTGC CGCCAGTGTA TGCGCCCACA GCGATTTAAT CTTCACTCTG
CCCTCGAGCT TTGCAAGGCA CGCCTGCCAG CTCTATCCGC TTAAACTACT GTCCTTACCC
TTCGAATTTA TGCCCATGGC CTATGTATTG TTATGGCATC AAAGAAATGA TGAAGATCAG
GGGCATAAAT GGATTAGAGA AACGATTTGC CAGAGTGTCG CTAAGTTATT TACTCCCGCA
GAAATGCTTT AA
 
Protein sequence
MNIDNLARID LNLLVILKVL LEEQSVTRAA SRLHISQSAL SKSLNRLRET LDDPLFQRTA 
HGLKPTAHAL ILGQKLPNIL QDLYQLTQPP TFNPASSNRQ FSFAMVESAY ETLIPYFIGP
MLTTAPNVKL DSYVWTEKSM QDLQQGQIDF GISGRDLHPL SDFQVDRLPE GIAYQTLFTD
QQVCLVREDH PLMAALTSAQ WKLPLYLDMA HVQVRCEGSD WWALDYFLAD LGHRRRISTT
VPDFYGAASV CAHSDLIFTL PSSFARHACQ LYPLKLLSLP FEFMPMAYVL LWHQRNDEDQ
GHKWIRETIC QSVAKLFTPA EML