Gene Shew185_4124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4124 
Symbol 
ID5371052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp4921757 
End bp4922614 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content50% 
IMG OID640832390 
Producthypothetical protein 
Protein accessionYP_001368304 
Protein GI153002623 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000621435 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTTG TCATCGCCTT ACTCGCCCCT GTATTTTGGG GGACGACCTA TGCGTTAGTG 
AGTCTCTACT TACATGATAT GTCGCCCTAT TGGGTGGCCG TGTGGCGCGC GCTGCCTGCG
GGAATACTGA TGTTGATGCT GCGTCCACGT TTACCAACGC TGGCTTGGTC TAAATTAAGC
TTGCTGGCGT TTTGTAATAT TGGCGCCTTC TTTGCGCTGC TGTTTATCGG TGCGTATCGT
TTGCCGGGCG CTGTGGCGGG TACCTTAGGG GCGACGCTGC CGTTAATTTT CTTAATCTTA
GCTTGGGTGA TAGATAAAAA ACGCCCTGGG ATGAAGTGGT TGCTATTAGG TTTGATGGGA
TTAGGAGGAG TGATTTTACT GCTAAACCCG TCGGCGGATC TCGACCCTAT TGGGGTCTTG
TGTATGCTAA GTGCGACGAC CTTAATTGCT TTCTCTTCTC GCTGGATGCA AAAGTGGGAT
GTGGGTGACT TTTTAGTGCT CACAGCATGG CAACTGTTTT TGGGCGGCTT GATGTTAATT
CCGCTGGCAT GGTTTATGGC GGGCCCGCCG CAGTTACCTA GCCTGACAGT GGTGCCGTCG
TTACTATGGT TAGTGATTGC CAACACCGCC ATCGCTTATT GGGCTTGGCT GTGGTCGATG
CGAAATTTAG GACCAGAAAT CATGGGCATG GTCGCTTTAG TCAATCCCGT GGTTGCCGTA
TCATTAGGCG TATTGATTGT GGGTGAGACA TTAGACATGC GTCAGTGGGC GGGGATAGGT
GTAATATTAC TGTCGCTGTT GTTGATGAAA TTGCCACAGA ATTTAAGGTT AAATCCATTT
AAAAAAGTGC AGCCCTAG
 
Protein sequence
MPFVIALLAP VFWGTTYALV SLYLHDMSPY WVAVWRALPA GILMLMLRPR LPTLAWSKLS 
LLAFCNIGAF FALLFIGAYR LPGAVAGTLG ATLPLIFLIL AWVIDKKRPG MKWLLLGLMG
LGGVILLLNP SADLDPIGVL CMLSATTLIA FSSRWMQKWD VGDFLVLTAW QLFLGGLMLI
PLAWFMAGPP QLPSLTVVPS LLWLVIANTA IAYWAWLWSM RNLGPEIMGM VALVNPVVAV
SLGVLIVGET LDMRQWAGIG VILLSLLLMK LPQNLRLNPF KKVQP