Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4124 |
Symbol | |
ID | 5371052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 4921757 |
End bp | 4922614 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640832390 |
Product | hypothetical protein |
Protein accession | YP_001368304 |
Protein GI | 153002623 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000621435 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTTTTG TCATCGCCTT ACTCGCCCCT GTATTTTGGG GGACGACCTA TGCGTTAGTG AGTCTCTACT TACATGATAT GTCGCCCTAT TGGGTGGCCG TGTGGCGCGC GCTGCCTGCG GGAATACTGA TGTTGATGCT GCGTCCACGT TTACCAACGC TGGCTTGGTC TAAATTAAGC TTGCTGGCGT TTTGTAATAT TGGCGCCTTC TTTGCGCTGC TGTTTATCGG TGCGTATCGT TTGCCGGGCG CTGTGGCGGG TACCTTAGGG GCGACGCTGC CGTTAATTTT CTTAATCTTA GCTTGGGTGA TAGATAAAAA ACGCCCTGGG ATGAAGTGGT TGCTATTAGG TTTGATGGGA TTAGGAGGAG TGATTTTACT GCTAAACCCG TCGGCGGATC TCGACCCTAT TGGGGTCTTG TGTATGCTAA GTGCGACGAC CTTAATTGCT TTCTCTTCTC GCTGGATGCA AAAGTGGGAT GTGGGTGACT TTTTAGTGCT CACAGCATGG CAACTGTTTT TGGGCGGCTT GATGTTAATT CCGCTGGCAT GGTTTATGGC GGGCCCGCCG CAGTTACCTA GCCTGACAGT GGTGCCGTCG TTACTATGGT TAGTGATTGC CAACACCGCC ATCGCTTATT GGGCTTGGCT GTGGTCGATG CGAAATTTAG GACCAGAAAT CATGGGCATG GTCGCTTTAG TCAATCCCGT GGTTGCCGTA TCATTAGGCG TATTGATTGT GGGTGAGACA TTAGACATGC GTCAGTGGGC GGGGATAGGT GTAATATTAC TGTCGCTGTT GTTGATGAAA TTGCCACAGA ATTTAAGGTT AAATCCATTT AAAAAAGTGC AGCCCTAG
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Protein sequence | MPFVIALLAP VFWGTTYALV SLYLHDMSPY WVAVWRALPA GILMLMLRPR LPTLAWSKLS LLAFCNIGAF FALLFIGAYR LPGAVAGTLG ATLPLIFLIL AWVIDKKRPG MKWLLLGLMG LGGVILLLNP SADLDPIGVL CMLSATTLIA FSSRWMQKWD VGDFLVLTAW QLFLGGLMLI PLAWFMAGPP QLPSLTVVPS LLWLVIANTA IAYWAWLWSM RNLGPEIMGM VALVNPVVAV SLGVLIVGET LDMRQWAGIG VILLSLLLMK LPQNLRLNPF KKVQP
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