| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4123 |
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| Symbol | |
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| ID | 5371051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4920787 |
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| End bp | 4921728 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640832389 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001368303 |
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| Protein GI | 153002622 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000527418 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAAAC GTTTGGATCT GAATTTACTA CCTGTACTTG AAATCCTGCT TGAGGAACAA
AGTGTGACGG CCGCTGCGGC GCGTTTGCAT TTGAGCCAGT CGGCGGTGAG TAAACAACTG
ACACGCCTGA GGGAAGTGTT TGATGATCCT CTGTTTGAGC GCACCGCCTA CGGCTTAAAG
CCGACGCCTA AAGCTTTGTC ACTCGCGCCT GAATTGCGCC AATGTTTACA GCAATTGGCG
CAATTTACGC GGCCCGACAC CTTCGAGCCC GCCTTAAGTC AGCGGCAGTT TAGAATGCAT
TTGGTTGAGA CCACATACTC GCTCACTTTT CCGCATTTTA TGCCCTCGCT GCTCGCCCAA
GCGCCCGGTG TTAGTCTCAA TTGCCAAACT TGGCGGCTCG ATACTATGGA CAGATTACTG
CGCTGCGACA TCGACTTAGC CATAGGTTGC CGCGAGTGGG ACGAGCGTTC GCCTATGCAT
GTGAATCATA TTCCCGATGA CTTGTGCCAT GTCGAGTTAG TGCAGGATTA TACTGTGTGC
TTGATGCGCC GCGATCATCC GGCGTTAGCA CAAGAGTGGA ATTTAGACAC CTTCTTGAGC
TATCGCCATC TGCAAGTGGC TTTTGGTGGC ATAGAGCATT GGTTGCTGGA TGATGTGCTG
CAACTTGAGG GCCGTCAGCG CGATATCGCC GTGAACATGA CCGACTTTCA GAGTGCTATG
GCCCTGTGTG AACAAAGCGA TTTAATTCTT TGCGCGCCGT CCCGTTATGC CTTTGCTGTG
ATGAAATCCT TCGAGCTTCA GTCTTTACCA TCTCCTATCA AGCTGATCCC CGGCGCGTAT
TTATTGATGT GGCATAAACA CTTCGAGCAT GACTTGAGCC ATAAATGGCT ACGTGAGTTG
ATCATTAGCC AAGTGCTGCC GTCGATTACG CCTCGGGTTT AG
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| Protein sequence | MLKRLDLNLL PVLEILLEEQ SVTAAAARLH LSQSAVSKQL TRLREVFDDP LFERTAYGLK
PTPKALSLAP ELRQCLQQLA QFTRPDTFEP ALSQRQFRMH LVETTYSLTF PHFMPSLLAQ
APGVSLNCQT WRLDTMDRLL RCDIDLAIGC REWDERSPMH VNHIPDDLCH VELVQDYTVC
LMRRDHPALA QEWNLDTFLS YRHLQVAFGG IEHWLLDDVL QLEGRQRDIA VNMTDFQSAM
ALCEQSDLIL CAPSRYAFAV MKSFELQSLP SPIKLIPGAY LLMWHKHFEH DLSHKWLREL
IISQVLPSIT PRV
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